Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RPS5P7-201ENST00000456664 608 ntBASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 AC020890.1-201ENST00000491837 504 ntBASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 AC104971.1-201ENST00000495117 578 ntBASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 HMGB1P46-201ENST00000520062 610 ntBASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 AP001880.2-201ENST00000538233 448 ntBASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 AC008083.2-201ENST00000546707 476 ntBASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 AC015849.2-201ENST00000605738 409 ntBASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 CR589904.2-201ENST00000612533 440 ntBASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 AC073342.3-201ENST00000624211 193 ntBASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 HSPD1P11-201ENST00000508643 1702 ntBASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 AL445487.1-201ENST00000415694 1580 ntBASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 SNORD51.1-201ENST00000365405 77 ntBASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 RNU6-178P-201ENST00000384631 104 ntBASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 RNU1-82P-201ENST00000390851 165 ntBASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 RNA5SP113-201ENST00000410486 84 ntBASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 USP9YP9-201ENST00000429406 715 ntBASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 ARL4AP4-201ENST00000434170 518 ntBASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 OR1H1P-201ENST00000448731 937 ntBASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 SCARNA22-201ENST00000503991 125 ntBASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 AC108471.1-201ENST00000513977 287 ntBASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 RNU6-1308P-201ENST00000516817 103 ntBASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 AC096553.1-201ENST00000605169 829 ntBASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 AL096803.3-201ENST00000609032 532 ntBASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 AC007342.8-201ENST00000623278 678 ntBASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 SALL4P2-201ENST00000423288 2910 ntBASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 SDAD1P1-202ENST00000524156 2051 ntBASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 AC009501.3-201ENST00000605001 1352 ntBASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.5□□□□□ -1.69
ATG4BQ9Y4P1 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AL442639.1-201ENST00000625030 1899 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AL359922.3-201ENST00000624779 1670 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AC009229.4-201ENST00000623854 1947 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AL672167.1-205ENST00000641112 3080 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 BMS1P3-201ENST00000372011 932 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AL590762.2-201ENST00000395798 571 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 VDAC2P1-201ENST00000399358 958 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 RPS27AP11-201ENST00000402798 447 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AL592291.1-201ENST00000403830 352 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms