Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 PNPT1P2-201ENST00000456768 2050 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AC096656.1-201ENST00000623826 1364 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 RNA5SP510-201ENST00000364697 99 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 LYPLA1P3-201ENST00000402650 695 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 RN7SKP216-201ENST00000411050 312 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 RN7SKP126-201ENST00000411143 300 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 DPPA2P3-201ENST00000411853 655 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 TBCAP2-201ENST00000416175 326 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 RPS3P2-201ENST00000421346 701 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AL391219.1-201ENST00000422570 483 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 RWDD4P2-201ENST00000426392 563 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 MTCO1P52-201ENST00000433928 531 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 RPS20P1-201ENST00000434853 354 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AL353748.1-201ENST00000440753 474 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AC000111.2-201ENST00000448200 210 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 RWDD4P1-201ENST00000488019 565 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 RPS27AP16-201ENST00000492222 470 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 RN7SL466P-201ENST00000497546 295 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 COX6B1P5-201ENST00000509843 249 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AL049779.2-201ENST00000553847 315 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AL049870.4-201ENST00000555741 486 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AC021483.2-201ENST00000567415 758 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AC020658.4-201ENST00000613987 684 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 MIR6837-201ENST00000620884 64 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AC004808.2-201ENST00000627965 773 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AC011493.1-201ENST00000596753 1632 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 A2MP1-204ENST00000566278 4130 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 CYP1D1P-201ENST00000416662 1433 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 AL355852.1-201ENST00000454081 1771 ntBASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
KCNIP3Q9Y2W7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 Z73965.1-201ENST00000623412 2297 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 RNU1-43P-201ENST00000365052 165 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 RNU6-185P-201ENST00000384421 107 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 RNU6-146P-201ENST00000384602 108 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 MIR93-201ENST00000385024 80 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 AC013404.1-201ENST00000413068 249 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 AC019050.1-201ENST00000418508 492 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 Z74021.1-201ENST00000423610 407 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 AC005033.1-201ENST00000428904 813 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 RPL23AP25-201ENST00000430973 463 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 RPL7L1P9-201ENST00000431298 745 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 AP000281.1-201ENST00000444036 316 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 HMGN1P36-201ENST00000446623 298 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 AL451050.1-201ENST00000450126 415 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 HMGB1P5-202ENST00000451497 985 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 ATP5G1P3-201ENST00000463301 410 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 RPL23AP12-201ENST00000467573 473 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 HMGN2P25-201ENST00000486956 268 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms