Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AC073358.1-201ENST00000505671 684 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 IGKV2D-10-201ENST00000520194 281 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 RPL23AP53-201ENST00000521854 457 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 HNRNPCP4-201ENST00000571636 900 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AP005901.4-201ENST00000577336 569 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 MIR4715-201ENST00000584117 79 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AC022726.1-201ENST00000587475 207 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AC093765.1-201ENST00000603758 881 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AC010424.2-201ENST00000607594 443 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AC017076.1-201ENST00000607613 578 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AL049555.1-201ENST00000562834 1933 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AC091046.3-201ENST00000631455 1574 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AL592182.3-201ENST00000642132 3304 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 LINC01109-201ENST00000603837 3081 ntBASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 SNORA70.2-201ENST00000364506 135 ntBASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 RN7SKP199-201ENST00000410325 305 ntBASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 FABP7P1-201ENST00000424004 391 ntBASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 TXNP2-201ENST00000443918 295 ntBASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 AL356981.1-201ENST00000454879 684 ntBASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 RNU2-30P-201ENST00000516209 141 ntBASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 BUD31P1-201ENST00000521828 359 ntBASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 AC090819.1-201ENST00000523800 1111 ntBASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 AC133555.2-201ENST00000550213 292 ntBASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 AL359757.1-201ENST00000623176 255 ntBASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 AC243960.7-201ENST00000623532 707 ntBASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 NEAT1-202ENST00000501122 22743 ntBASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
TM9SF3Q9HD45 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 RNA5SP345-201ENST00000410646 108 ntBASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 RN7SKP222-201ENST00000410651 315 ntBASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 AC006065.1-201ENST00000422539 802 ntBASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 RPL23AP1-201ENST00000428990 471 ntBASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 ARL2BPP10-201ENST00000446487 531 ntBASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 RPS17P2-201ENST00000461663 408 ntBASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 HMGN1P8-201ENST00000463578 288 ntBASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 RPL5P30-201ENST00000465511 891 ntBASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 AC112206.1-201ENST00000468416 477 ntBASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 AC104971.1-201ENST00000495117 578 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms