Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RAD9AQ99638 AL161637.1-201ENST00000622380 412 ntBASIC5.13□□□□□ -1.59
RAD9AQ99638 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RAD9AQ99638 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.13□□□□□ -1.59
RAD9AQ99638 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
RAD9AQ99638 TLK1P1-201ENST00000456760 2440 ntBASIC5.13□□□□□ -1.59
RAD9AQ99638 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RAD9AQ99638 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RAD9AQ99638 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.12□□□□□ -1.59
RAD9AQ99638 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.12□□□□□ -1.59
RAD9AQ99638 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAD9AQ99638 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAD9AQ99638 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAD9AQ99638 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAD9AQ99638 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RAD9AQ99638 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAD9AQ99638 RNU1-85P-201ENST00000364127 164 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 SNORA37-201ENST00000384504 129 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.12□□□□□ -1.59
RAD9AQ99638 COX5BP7-201ENST00000414780 274 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.12□□□□□ -1.59
RAD9AQ99638 AC007563.3-201ENST00000433233 371 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 CBX1P1-201ENST00000440184 427 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 CYCSP34-201ENST00000458172 304 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.12□□□□□ -1.59
RAD9AQ99638 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.12□□□□□ -1.59
RAD9AQ99638 AC090543.1-201ENST00000492168 485 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 RN7SL558P-201ENST00000497468 299 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.12□□□□□ -1.59
RAD9AQ99638 MTCO1P35-201ENST00000515270 228 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 AC016550.3-201ENST00000515706 767 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 RNU6-467P-201ENST00000517027 110 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.12□□□□□ -1.59
RAD9AQ99638 LINC00557-201ENST00000563184 1279 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.12□□□□□ -1.59
RAD9AQ99638 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.12□□□□□ -1.59
RAD9AQ99638 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.12□□□□□ -1.59
RAD9AQ99638 BNIP3P22-201ENST00000593399 556 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 VN1R85P-201ENST00000601587 426 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 RNF138P2-201ENST00000603490 592 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 AC115286.1-201ENST00000604298 434 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.12□□□□□ -1.59
RAD9AQ99638 AC019080.5-201ENST00000624891 757 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.12□□□□□ -1.59
RAD9AQ99638 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.12□□□□□ -1.59
RAD9AQ99638 AC010300.1-201ENST00000600671 5134 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 ADAM5-202ENST00000399789 1942 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RAD9AQ99638 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
RAD9AQ99638 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.12□□□□□ -1.59
RAD9AQ99638 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.12□□□□□ -1.59
RAD9AQ99638 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAD9AQ99638 DDX6P1-205ENST00000441966 1436 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.12□□□□□ -1.59
RAD9AQ99638 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.12□□□□□ -1.59
RAD9AQ99638 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RAD9AQ99638 VPS35P1-201ENST00000563400 1518 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAD9AQ99638 MUC2-202ENST00000613187 4845 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAD9AQ99638 IQCB2P-201ENST00000401788 1633 ntBASIC5.12□□□□□ -1.59
RAD9AQ99638 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RAD9AQ99638 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.11□□□□□ -1.59
RAD9AQ99638 ZNF137P-201ENST00000456718 1920 ntBASIC5.11□□□□□ -1.59
RAD9AQ99638 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.11□□□□□ -1.59
RAD9AQ99638 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAD9AQ99638 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RAD9AQ99638 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RAD9AQ99638 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.11□□□□□ -1.59
RAD9AQ99638 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAD9AQ99638 SNORA70C-201ENST00000384538 135 ntBASIC5.11□□□□□ -1.59
RAD9AQ99638 MIR23A-201ENST00000385245 73 ntBASIC5.11□□□□□ -1.59
RAD9AQ99638 UBE2V1P15-201ENST00000407776 448 ntBASIC5.11□□□□□ -1.59
RAD9AQ99638 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.11□□□□□ -1.59
RAD9AQ99638 AL158073.1-201ENST00000426848 1104 ntBASIC5.11□□□□□ -1.59
RAD9AQ99638 AL390879.2-203ENST00000426943 1121 ntBASIC5.11□□□□□ -1.59
RAD9AQ99638 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.11□□□□□ -1.59
RAD9AQ99638 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.11□□□□□ -1.59
RAD9AQ99638 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.11□□□□□ -1.59
RAD9AQ99638 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.11□□□□□ -1.59
RAD9AQ99638 H2AFZP5-201ENST00000446960 382 ntBASIC5.11□□□□□ -1.59
RAD9AQ99638 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.11□□□□□ -1.59
RAD9AQ99638 RPL21P129-201ENST00000491732 478 ntBASIC5.11□□□□□ -1.59
RAD9AQ99638 AL049874.2-201ENST00000492636 288 ntBASIC5.11□□□□□ -1.59
RAD9AQ99638 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.11□□□□□ -1.59
RAD9AQ99638 SETP12-201ENST00000514068 805 ntBASIC5.11□□□□□ -1.59
RAD9AQ99638 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.11□□□□□ -1.59
RAD9AQ99638 RN7SL290P-201ENST00000578661 300 ntBASIC5.11□□□□□ -1.59
RAD9AQ99638 AL133338.2-201ENST00000604292 736 ntBASIC5.11□□□□□ -1.59
RAD9AQ99638 AC007423.1-201ENST00000605009 627 ntBASIC5.11□□□□□ -1.59
RAD9AQ99638 AC018695.5-201ENST00000605872 315 ntBASIC5.11□□□□□ -1.59
RAD9AQ99638 AC023813.4-201ENST00000607580 580 ntBASIC5.11□□□□□ -1.59
RAD9AQ99638 AL133243.1-201ENST00000614487 366 ntBASIC5.11□□□□□ -1.59
RAD9AQ99638 AL356490.1-201ENST00000623079 479 ntBASIC5.11□□□□□ -1.59
RAD9AQ99638 AP003400.6-201ENST00000624698 740 ntBASIC5.11□□□□□ -1.59
RAD9AQ99638 AC006453.5-201ENST00000636451 619 ntBASIC5.11□□□□□ -1.59
RAD9AQ99638 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAD9AQ99638 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms