Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC110998.1-201ENST00000519029 2053 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
HLA-CQ95604 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.35□□□□□ -1.23
HLA-CQ95604 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.35□□□□□ -1.23
HLA-CQ95604 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-CQ95604 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-CQ95604 AC090132.1-201ENST00000524071 1480 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
HLA-CQ95604 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-CQ95604 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-CQ95604 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-CQ95604 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-CQ95604 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC7.35□□□□□ -1.23
HLA-CQ95604 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC7.35□□□□□ -1.23
HLA-CQ95604 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 CDY19P-201ENST00000411668 1613 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 CDY18P-201ENST00000438294 1609 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
HLA-CQ95604 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
HLA-CQ95604 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
HLA-CQ95604 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
HLA-CQ95604 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
HLA-CQ95604 DGKG-202ENST00000344484 3445 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
HLA-CQ95604 RN7SKP275-201ENST00000364626 301 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 DEFB109C-201ENST00000382575 264 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 DEFB109B-201ENST00000382656 264 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 AL583835.1-201ENST00000399570 407 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.34□□□□□ -1.23
HLA-CQ95604 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7.34□□□□□ -1.23
HLA-CQ95604 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC7.34□□□□□ -1.23
HLA-CQ95604 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC7.34□□□□□ -1.23
HLA-CQ95604 AL391987.1-201ENST00000441025 200 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.34□□□□□ -1.23
HLA-CQ95604 RPS4XP10-201ENST00000465034 731 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 AC010301.1-201ENST00000473936 355 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 RN7SL654P-201ENST00000479178 292 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 AC011005.3-201ENST00000491624 395 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC7.34□□□□□ -1.23
HLA-CQ95604 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 AC022296.2-201ENST00000512424 202 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 SNORD27.1-201ENST00000516319 72 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 RNU6-1137P-201ENST00000517073 99 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC7.34□□□□□ -1.23
HLA-CQ95604 ARL6IP1P3-201ENST00000524544 560 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC7.34□□□□□ -1.23
HLA-CQ95604 OR52K3P-201ENST00000531655 943 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC7.34□□□□□ -1.23
HLA-CQ95604 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC7.34□□□□□ -1.23
HLA-CQ95604 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC7.34□□□□□ -1.23
HLA-CQ95604 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC7.34□□□□□ -1.23
HLA-CQ95604 MIR4680-201ENST00000580906 66 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.34□□□□□ -1.23
HLA-CQ95604 AC017100.2-201ENST00000584628 355 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.34□□□□□ -1.23
HLA-CQ95604 SMIM12P1-201ENST00000603004 274 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 AC245389.1-201ENST00000605141 529 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 HMGB1P24-202ENST00000615653 685 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 AC007546.1-201ENST00000619452 559 ntBASIC7.34□□□□□ -1.23
HLA-CQ95604 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.34□□□□□ -1.23
HLA-CQ95604 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.34□□□□□ -1.23
HLA-CQ95604 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
HLA-CQ95604 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC7.34□□□□□ -1.23
HLA-CQ95604 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.34□□□□□ -1.23
HLA-CQ95604 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC7.34□□□□□ -1.23
HLA-CQ95604 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.34□□□□□ -1.23
HLA-CQ95604 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-CQ95604 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
HLA-CQ95604 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
HLA-CQ95604 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-CQ95604 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-CQ95604 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-CQ95604 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC7.33□□□□□ -1.24
HLA-CQ95604 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
HLA-CQ95604 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-CQ95604 AC018688.1-201ENST00000636528 1754 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-CQ95604 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
HLA-CQ95604 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-CQ95604 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms