Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AL132640.2-201ENST00000559968 1698 ntBASIC5.51□□□□□ -1.53
HERC6Q8IVU3 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 SNORA62.2-201ENST00000364672 152 ntBASIC5.51□□□□□ -1.53
HERC6Q8IVU3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 RPS3AP23-201ENST00000401762 784 ntBASIC5.51□□□□□ -1.53
HERC6Q8IVU3 VTA1P1-201ENST00000414044 866 ntBASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AL445183.3-201ENST00000414168 502 ntBASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 PTP4A1P7-201ENST00000423476 514 ntBASIC5.51□□□□□ -1.53
HERC6Q8IVU3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AL136231.1-201ENST00000429407 730 ntBASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AL161722.2-201ENST00000434731 981 ntBASIC5.51□□□□□ -1.53
HERC6Q8IVU3 RPL12P18-201ENST00000437175 325 ntBASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AP000936.3-201ENST00000438127 255 ntBASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AL359265.1-201ENST00000440296 795 ntBASIC5.51□□□□□ -1.53
HERC6Q8IVU3 OR7E125P-201ENST00000443450 846 ntBASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 GAPDHP14-201ENST00000450472 937 ntBASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AL161747.1-201ENST00000480068 358 ntBASIC5.51□□□□□ -1.53
HERC6Q8IVU3 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AC111000.3-201ENST00000508057 576 ntBASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AC108471.1-201ENST00000513977 287 ntBASIC5.51□□□□□ -1.53
HERC6Q8IVU3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AGGF1P9-201ENST00000561884 913 ntBASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AC006927.2-201ENST00000639256 389 ntBASIC5.51□□□□□ -1.53
HERC6Q8IVU3 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 AC100757.1-201ENST00000616872 1835 ntBASIC5.51□□□□□ -1.53
HERC6Q8IVU3 SAMMSON-226ENST00000642089 1582 ntBASIC5.5□□□□□ -1.53
HERC6Q8IVU3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 TTC39DP-201ENST00000416781 1688 ntBASIC5.5□□□□□ -1.53
HERC6Q8IVU3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 MIR298-201ENST00000401212 88 ntBASIC5.5□□□□□ -1.53
HERC6Q8IVU3 AL021331.1-201ENST00000402817 582 ntBASIC5.5□□□□□ -1.53
HERC6Q8IVU3 LINC01881-201ENST00000416103 412 ntBASIC5.5□□□□□ -1.53
HERC6Q8IVU3 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.5□□□□□ -1.53
HERC6Q8IVU3 HSFY1P1-201ENST00000423928 1178 ntBASIC5.5□□□□□ -1.53
HERC6Q8IVU3 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 RPL10P17-201ENST00000453852 316 ntBASIC5.5□□□□□ -1.53
HERC6Q8IVU3 AC022133.1-201ENST00000490961 571 ntBASIC5.5□□□□□ -1.53
HERC6Q8IVU3 AC093801.2-201ENST00000503966 1050 ntBASIC5.5□□□□□ -1.53
HERC6Q8IVU3 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 HMGB1P1-201ENST00000522557 636 ntBASIC5.5□□□□□ -1.53
HERC6Q8IVU3 OR5AK3P-201ENST00000527486 1297 ntBASIC5.5□□□□□ -1.53
HERC6Q8IVU3 AC009643.1-201ENST00000532030 391 ntBASIC5.5□□□□□ -1.53
HERC6Q8IVU3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 POLR2KP1-201ENST00000553226 168 ntBASIC5.5□□□□□ -1.53
HERC6Q8IVU3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 OR1AB1P-201ENST00000585564 761 ntBASIC5.5□□□□□ -1.53
HERC6Q8IVU3 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 AL162574.1-201ENST00000615702 950 ntBASIC5.5□□□□□ -1.53
HERC6Q8IVU3 AC090772.4-201ENST00000623599 362 ntBASIC5.5□□□□□ -1.53
HERC6Q8IVU3 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HERC6Q8IVU3 ABCC13-202ENST00000463099 3842 ntBASIC5.5□□□□□ -1.53
HERC6Q8IVU3 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms