Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 AC108359.1-201ENST00000616451 1211 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 AC024595.1-201ENST00000623088 387 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 AC015871.5-202ENST00000623252 701 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 AC068057.2-201ENST00000624047 895 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 BX649567.1-201ENST00000642071 1134 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHFQ7M4L6 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHFQ7M4L6 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SHFQ7M4L6 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHFQ7M4L6 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SHFQ7M4L6 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SHFQ7M4L6 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SHFQ7M4L6 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
SHFQ7M4L6 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.65□□□□□ -1.66
SHFQ7M4L6 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SHFQ7M4L6 AL672167.1-205ENST00000641112 3080 ntBASIC4.65□□□□□ -1.66
SHFQ7M4L6 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
SHFQ7M4L6 CASC19-284ENST00000642142 1868 ntBASIC4.65□□□□□ -1.66
SHFQ7M4L6 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SHFQ7M4L6 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.65□□□□□ -1.66
SHFQ7M4L6 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
SHFQ7M4L6 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 MIR133B-201ENST00000362210 119 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 RNU4-28P-201ENST00000364739 141 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 RNU1-74P-201ENST00000384108 171 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 RNA5SP284-201ENST00000384547 118 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 AL078599.1-201ENST00000402075 293 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 AC013429.2-201ENST00000418798 781 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 MTCO2P21-201ENST00000419780 677 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 OR2AH1P-201ENST00000425717 928 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SHFQ7M4L6 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 RPL7AP61-201ENST00000443410 636 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 AL592437.1-201ENST00000443781 492 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 Z77249.1-201ENST00000444622 1175 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 HMGN1P2-201ENST00000445197 310 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 RNU7-27P-201ENST00000459281 62 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 RN7SL447P-201ENST00000494711 245 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 PRELID3BP4-201ENST00000515476 571 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 SNORD46.2-201ENST00000516021 102 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 RNA5SP464-201ENST00000516251 108 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 HMGB1P1-201ENST00000522557 636 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 AP002373.2-201ENST00000541631 1060 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 BLZF2P-201ENST00000553776 1130 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 OR4U1P-201ENST00000554958 912 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 AC023824.3-201ENST00000569003 562 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SHFQ7M4L6 MIR1273E-201ENST00000581165 102 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 AC008814.1-201ENST00000603797 406 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 AC000068.2-201ENST00000608816 460 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 AC120349.3-201ENST00000624377 529 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHFQ7M4L6 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SHFQ7M4L6 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHFQ7M4L6 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHFQ7M4L6 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHFQ7M4L6 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 AL034370.1-201ENST00000397254 1590 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.65□□□□□ -1.67
SHFQ7M4L6 AC111188.2-201ENST00000529697 1387 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 CASC19-221ENST00000641309 1382 ntBASIC4.65□□□□□ -1.67
SHFQ7M4L6 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SHFQ7M4L6 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHFQ7M4L6 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms