Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC011445.2-201ENST00000599274 173 ntBASIC4.77□□□□□ -1.65
CDH13P55290 RNF138P2-201ENST00000603490 592 ntBASIC4.77□□□□□ -1.65
CDH13P55290 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.77□□□□□ -1.65
CDH13P55290 AC055764.2-201ENST00000610089 670 ntBASIC4.77□□□□□ -1.65
CDH13P55290 VN1R9P-201ENST00000614184 867 ntBASIC4.77□□□□□ -1.65
CDH13P55290 AC139769.3-201ENST00000618383 175 ntBASIC4.77□□□□□ -1.65
CDH13P55290 AL138955.1-201ENST00000622881 1040 ntBASIC4.77□□□□□ -1.65
CDH13P55290 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH13P55290 AC010872.1-201ENST00000624225 675 ntBASIC4.77□□□□□ -1.65
CDH13P55290 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH13P55290 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH13P55290 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH13P55290 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH13P55290 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH13P55290 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH13P55290 LINC01355-201ENST00000566551 5444 ntBASIC4.77□□□□□ -1.65
CDH13P55290 AC083843.3-201ENST00000623679 2186 ntBASIC4.77□□□□□ -1.65
CDH13P55290 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH13P55290 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH13P55290 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH13P55290 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH13P55290 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDH13P55290 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH13P55290 AP002784.2-201ENST00000397300 549 ntBASIC4.76□□□□□ -1.65
CDH13P55290 AL592291.1-201ENST00000403830 352 ntBASIC4.76□□□□□ -1.65
CDH13P55290 AL391361.1-201ENST00000405580 489 ntBASIC4.76□□□□□ -1.65
CDH13P55290 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.76□□□□□ -1.65
CDH13P55290 U3.36-201ENST00000408418 213 ntBASIC4.76□□□□□ -1.65
CDH13P55290 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH13P55290 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH13P55290 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDH13P55290 AC013404.1-201ENST00000413068 249 ntBASIC4.76□□□□□ -1.65
CDH13P55290 HMGB3P31-201ENST00000413333 595 ntBASIC4.76□□□□□ -1.65
CDH13P55290 LINC01881-201ENST00000416103 412 ntBASIC4.76□□□□□ -1.65
CDH13P55290 TBCAP2-201ENST00000416175 326 ntBASIC4.76□□□□□ -1.65
CDH13P55290 E2F6P2-201ENST00000420708 748 ntBASIC4.76□□□□□ -1.65
CDH13P55290 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.76□□□□□ -1.65
CDH13P55290 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.76□□□□□ -1.65
CDH13P55290 AC000111.2-201ENST00000448200 210 ntBASIC4.76□□□□□ -1.65
CDH13P55290 AURKAPS1-201ENST00000451805 1212 ntBASIC4.76□□□□□ -1.65
CDH13P55290 AL445433.1-201ENST00000457507 257 ntBASIC4.76□□□□□ -1.65
CDH13P55290 RN7SL172P-201ENST00000460535 303 ntBASIC4.76□□□□□ -1.65
CDH13P55290 AC112206.1-201ENST00000468416 477 ntBASIC4.76□□□□□ -1.65
CDH13P55290 AC079841.1-201ENST00000481228 950 ntBASIC4.76□□□□□ -1.65
CDH13P55290 RN7SL809P-201ENST00000482040 297 ntBASIC4.76□□□□□ -1.65
CDH13P55290 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH13P55290 AC020890.1-201ENST00000491837 504 ntBASIC4.76□□□□□ -1.65
CDH13P55290 AC005912.1-201ENST00000495392 255 ntBASIC4.76□□□□□ -1.65
CDH13P55290 PPM1AP1-201ENST00000502740 1135 ntBASIC4.76□□□□□ -1.65
CDH13P55290 RPL7L1P4-201ENST00000513004 707 ntBASIC4.76□□□□□ -1.65
CDH13P55290 AC112198.4-201ENST00000515450 351 ntBASIC4.76□□□□□ -1.65
CDH13P55290 RNU5A-7P-201ENST00000515979 116 ntBASIC4.76□□□□□ -1.65
CDH13P55290 RNA5SP464-201ENST00000516251 108 ntBASIC4.76□□□□□ -1.65
CDH13P55290 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH13P55290 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH13P55290 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH13P55290 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH13P55290 AC025260.1-201ENST00000548858 430 ntBASIC4.76□□□□□ -1.65
CDH13P55290 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.76□□□□□ -1.65
CDH13P55290 AC104072.1-201ENST00000568817 668 ntBASIC4.76□□□□□ -1.65
CDH13P55290 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH13P55290 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH13P55290 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH13P55290 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH13P55290 AC087783.2-201ENST00000605070 562 ntBASIC4.76□□□□□ -1.65
CDH13P55290 AC092953.2-201ENST00000608000 699 ntBASIC4.76□□□□□ -1.65
CDH13P55290 AC018645.2-201ENST00000609151 472 ntBASIC4.76□□□□□ -1.65
CDH13P55290 AP005229.2-201ENST00000609980 697 ntBASIC4.76□□□□□ -1.65
CDH13P55290 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH13P55290 AL022401.1-201ENST00000619498 108 ntBASIC4.76□□□□□ -1.65
CDH13P55290 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH13P55290 AC015804.1-201ENST00000622935 435 ntBASIC4.76□□□□□ -1.65
CDH13P55290 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH13P55290 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH13P55290 AC107027.3-201ENST00000565095 3473 ntBASIC4.76□□□□□ -1.65
CDH13P55290 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH13P55290 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDH13P55290 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.76□□□□□ -1.65
CDH13P55290 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
CDH13P55290 PABPC1P6-201ENST00000445594 1829 ntBASIC4.76□□□□□ -1.65
CDH13P55290 AC008758.3-201ENST00000507003 1829 ntBASIC4.76□□□□□ -1.65
CDH13P55290 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH13P55290 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH13P55290 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.76□□□□□ -1.65
CDH13P55290 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH13P55290 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH13P55290 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CDH13P55290 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH13P55290 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH13P55290 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH13P55290 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH13P55290 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDH13P55290 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH13P55290 AL034370.1-201ENST00000397254 1590 ntBASIC4.75□□□□□ -1.65
CDH13P55290 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH13P55290 IGKV7-3-201ENST00000357453 298 ntBASIC4.75□□□□□ -1.65
CDH13P55290 RNA5SP428-201ENST00000365129 132 ntBASIC4.75□□□□□ -1.65
CDH13P55290 RNU6-481P-201ENST00000384194 107 ntBASIC4.75□□□□□ -1.65
CDH13P55290 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CDH13P55290 RNU6-1176P-201ENST00000390955 107 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms