Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXC8P31273 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXC8P31273 AC007016.1-201ENST00000512110 244 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXC8P31273 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXC8P31273 AC020910.2-201ENST00000603635 610 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXC8P31273 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXC8P31273 AP001005.3-201ENST00000622049 129 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 AL049536.1-201ENST00000625043 744 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 CCT8P1-201ENST00000413611 1657 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC8P31273 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC8P31273 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC8P31273 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXC8P31273 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC8P31273 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HOXC8P31273 AC024341.1-201ENST00000526444 1552 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 OR14L1P-202ENST00000641545 3009 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC8P31273 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXC8P31273 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXC8P31273 AP001029.2-203ENST00000589795 4910 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC8P31273 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXC8P31273 CASC19-260ENST00000641828 2001 ntBASIC5.19□□□□□ -1.58
HOXC8P31273 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC8P31273 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC8P31273 ZNF137P-201ENST00000456718 1920 ntBASIC5.19□□□□□ -1.58
HOXC8P31273 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXC8P31273 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC8P31273 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HOXC8P31273 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HOXC8P31273 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC8P31273 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC8P31273 SNORD115-48-201ENST00000364764 76 ntBASIC5.19□□□□□ -1.58
HOXC8P31273 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC8P31273 RNA5SP498-201ENST00000411342 120 ntBASIC5.19□□□□□ -1.58
HOXC8P31273 GAPDHP49-201ENST00000421421 961 ntBASIC5.19□□□□□ -1.58
HOXC8P31273 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.19□□□□□ -1.58
HOXC8P31273 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXC8P31273 RPL5P2-201ENST00000429598 854 ntBASIC5.19□□□□□ -1.58
HOXC8P31273 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC8P31273 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXC8P31273 AL356981.1-201ENST00000454879 684 ntBASIC5.19□□□□□ -1.58
HOXC8P31273 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXC8P31273 AC021660.1-201ENST00000465006 554 ntBASIC5.19□□□□□ -1.58
HOXC8P31273 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
HOXC8P31273 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC8P31273 AP000827.1-201ENST00000527814 258 ntBASIC5.19□□□□□ -1.58
HOXC8P31273 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC8P31273 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXC8P31273 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXC8P31273 AL049830.4-201ENST00000555149 351 ntBASIC5.19□□□□□ -1.58
HOXC8P31273 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXC8P31273 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC8P31273 AC105148.1-201ENST00000604961 409 ntBASIC5.19□□□□□ -1.58
HOXC8P31273 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC8P31273 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC8P31273 AP003497.2-201ENST00000624220 967 ntBASIC5.19□□□□□ -1.58
HOXC8P31273 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC8P31273 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC8P31273 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXC8P31273 AL359715.4-201ENST00000606629 1436 ntBASIC5.19□□□□□ -1.58
HOXC8P31273 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC8P31273 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXC8P31273 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC8P31273 MAPK10-328ENST00000641553 4009 ntBASIC5.19□□□□□ -1.58
HOXC8P31273 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC8P31273 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC8P31273 AP000473.2-201ENST00000602659 1537 ntBASIC5.18□□□□□ -1.58
HOXC8P31273 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC8P31273 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC8P31273 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
HOXC8P31273 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HOXC8P31273 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC8P31273 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC8P31273 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC8P31273 RNU6-532P-201ENST00000384318 107 ntBASIC5.18□□□□□ -1.58
HOXC8P31273 AL049693.1-201ENST00000402760 611 ntBASIC5.18□□□□□ -1.58
HOXC8P31273 SNORA11-201ENST00000408789 128 ntBASIC5.18□□□□□ -1.58
HOXC8P31273 RNA5SP296-201ENST00000410523 111 ntBASIC5.18□□□□□ -1.58
HOXC8P31273 AL354766.1-201ENST00000423396 542 ntBASIC5.18□□□□□ -1.58
HOXC8P31273 SEC63P1-201ENST00000425785 1258 ntBASIC5.18□□□□□ -1.58
HOXC8P31273 AC073143.1-201ENST00000436316 395 ntBASIC5.18□□□□□ -1.58
HOXC8P31273 AL590762.3-201ENST00000436372 640 ntBASIC5.18□□□□□ -1.58
HOXC8P31273 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXC8P31273 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXC8P31273 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
HOXC8P31273 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXC8P31273 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXC8P31273 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXC8P31273 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXC8P31273 AC025164.1-201ENST00000496249 478 ntBASIC5.18□□□□□ -1.58
HOXC8P31273 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXC8P31273 MTCO1P31-201ENST00000506355 492 ntBASIC5.18□□□□□ -1.58
HOXC8P31273 AC112206.4-201ENST00000515142 405 ntBASIC5.18□□□□□ -1.58
HOXC8P31273 RNU6-1308P-201ENST00000516817 103 ntBASIC5.18□□□□□ -1.58
HOXC8P31273 AC105031.1-201ENST00000518550 476 ntBASIC5.18□□□□□ -1.58
HOXC8P31273 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms