Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CNGA1P29973 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.25□□□□□ -1.41
CNGA1P29973 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.25□□□□□ -1.41
CNGA1P29973 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.25□□□□□ -1.41
CNGA1P29973 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.25□□□□□ -1.41
CNGA1P29973 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CNGA1P29973 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.25□□□□□ -1.41
CNGA1P29973 KYNUP3-201ENST00000574386 1341 ntBASIC6.25□□□□□ -1.41
CNGA1P29973 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CNGA1P29973 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.24□□□□□ -1.41
CNGA1P29973 AC092079.1-201ENST00000558620 1985 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.24□□□□□ -1.41
CNGA1P29973 LINC01963-201ENST00000562038 3148 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
CNGA1P29973 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.24□□□□□ -1.41
CNGA1P29973 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CNGA1P29973 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CNGA1P29973 RNA5SP453-201ENST00000362503 119 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 SNORA16A-201ENST00000384342 137 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CNGA1P29973 RNU1-149P-201ENST00000390870 161 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 ERHP2-201ENST00000402323 299 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 RNU6-575P-201ENST00000411326 105 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 RNU2-6P-201ENST00000411404 190 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.24□□□□□ -1.41
CNGA1P29973 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.24□□□□□ -1.41
CNGA1P29973 AL009174.1-201ENST00000426577 416 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 AC073069.1-201ENST00000428657 441 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.24□□□□□ -1.41
CNGA1P29973 HSD52-202ENST00000436225 772 ntTSL 3 BASIC6.24□□□□□ -1.41
CNGA1P29973 AC092809.1-201ENST00000441469 474 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 RPS11P7-201ENST00000442125 465 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 AC092647.3-201ENST00000443044 633 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.24□□□□□ -1.41
CNGA1P29973 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.24□□□□□ -1.41
CNGA1P29973 RPS7P6-201ENST00000485777 579 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
CNGA1P29973 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC6.24□□□□□ -1.41
CNGA1P29973 AC119751.5-201ENST00000514077 770 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 RPS27AP18-201ENST00000515536 459 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 RNU6-941P-201ENST00000516346 108 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 snoU109.6-201ENST00000516831 118 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 AC023632.1-201ENST00000518463 375 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 IGKV2-36-201ENST00000519999 223 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 VBP1-203ENST00000535916 944 ntTSL 2 BASIC6.24□□□□□ -1.41
CNGA1P29973 AC044913.1-201ENST00000557200 430 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.24□□□□□ -1.41
CNGA1P29973 AC114947.2-201ENST00000565748 2125 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 AC090751.1-201ENST00000566966 267 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 AC019322.1-201ENST00000571869 389 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 MIR5708-201ENST00000579723 85 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.24□□□□□ -1.41
CNGA1P29973 AP001269.3-201ENST00000588718 329 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 AC060780.2-201ENST00000589047 198 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
CNGA1P29973 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.24□□□□□ -1.41
CNGA1P29973 PCNAP1-202ENST00000595299 752 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 VN1R78P-201ENST00000597393 564 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC6.24□□□□□ -1.41
CNGA1P29973 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.24□□□□□ -1.41
CNGA1P29973 AC099676.1-201ENST00000608886 657 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 MFSD8-245ENST00000641743 948 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CNGA1P29973 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CNGA1P29973 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.24□□□□□ -1.41
CNGA1P29973 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CNGA1P29973 AC046144.1-201ENST00000478559 1853 ntBASIC6.24□□□□□ -1.41
CNGA1P29973 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CNGA1P29973 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.24□□□□□ -1.41
CNGA1P29973 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.23□□□□□ -1.41
CNGA1P29973 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.23□□□□□ -1.41
CNGA1P29973 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
CNGA1P29973 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.23□□□□□ -1.41
CNGA1P29973 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CNGA1P29973 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.23□□□□□ -1.41
CNGA1P29973 AC010266.2-201ENST00000564741 3255 ntBASIC6.23□□□□□ -1.41
CNGA1P29973 ZNF876P-202ENST00000398732 1485 ntBASIC6.23□□□□□ -1.41
CNGA1P29973 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.23□□□□□ -1.41
CNGA1P29973 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CNGA1P29973 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CNGA1P29973 AL109941.1-201ENST00000401925 229 ntBASIC6.23□□□□□ -1.41
CNGA1P29973 AL009179.1-201ENST00000406085 265 ntBASIC6.23□□□□□ -1.41
CNGA1P29973 FCF1P5-201ENST00000406490 482 ntBASIC6.23□□□□□ -1.41
CNGA1P29973 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC6.23□□□□□ -1.41
CNGA1P29973 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC6.23□□□□□ -1.41
CNGA1P29973 RNGTTP1-201ENST00000420965 728 ntBASIC6.23□□□□□ -1.41
CNGA1P29973 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.23□□□□□ -1.41
CNGA1P29973 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC6.23□□□□□ -1.41
CNGA1P29973 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.23□□□□□ -1.41
CNGA1P29973 AC092017.2-201ENST00000427600 362 ntBASIC6.23□□□□□ -1.41
CNGA1P29973 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.23□□□□□ -1.41
CNGA1P29973 MTATP6P26-201ENST00000445926 662 ntBASIC6.23□□□□□ -1.41
CNGA1P29973 PTENP1-201ENST00000447117 1215 ntBASIC6.23□□□□□ -1.41
CNGA1P29973 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CNGA1P29973 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CNGA1P29973 MRPL42P4-201ENST00000453267 443 ntBASIC6.23□□□□□ -1.41
CNGA1P29973 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC6.23□□□□□ -1.41
CNGA1P29973 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms