Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMGB1P09429 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGB1P09429 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMGB1P09429 MTCO2P31-201ENST00000402702 684 ntBASIC6.43□□□□□ -1.38
HMGB1P09429 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGB1P09429 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGB1P09429 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.43□□□□□ -1.38
HMGB1P09429 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMGB1P09429 HMGN2P27-201ENST00000427352 270 ntBASIC6.43□□□□□ -1.38
HMGB1P09429 HSPD1P12-201ENST00000429127 1069 ntBASIC6.43□□□□□ -1.38
HMGB1P09429 AL136231.1-201ENST00000429407 730 ntBASIC6.43□□□□□ -1.38
HMGB1P09429 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGB1P09429 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.43□□□□□ -1.38
HMGB1P09429 MTCYBP15-201ENST00000433123 1127 ntBASIC6.43□□□□□ -1.38
HMGB1P09429 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGB1P09429 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGB1P09429 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGB1P09429 RPS26P56-201ENST00000444468 240 ntBASIC6.43□□□□□ -1.38
HMGB1P09429 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.43□□□□□ -1.38
HMGB1P09429 RPS27AP15-201ENST00000447672 466 ntBASIC6.43□□□□□ -1.38
HMGB1P09429 AC104306.1-201ENST00000449702 371 ntBASIC6.43□□□□□ -1.38
HMGB1P09429 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGB1P09429 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGB1P09429 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGB1P09429 AC118282.2-201ENST00000508739 374 ntBASIC6.43□□□□□ -1.38
HMGB1P09429 AC021193.1-201ENST00000511607 420 ntBASIC6.43□□□□□ -1.38
HMGB1P09429 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMGB1P09429 SCARNA16.4-201ENST00000516956 187 ntBASIC6.43□□□□□ -1.38
HMGB1P09429 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGB1P09429 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC6.43□□□□□ -1.38
HMGB1P09429 AC106730.2-201ENST00000566641 540 ntBASIC6.43□□□□□ -1.38
HMGB1P09429 RN7SL356P-201ENST00000582228 248 ntBASIC6.43□□□□□ -1.38
HMGB1P09429 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGB1P09429 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGB1P09429 AC011492.1-201ENST00000600023 315 ntBASIC6.43□□□□□ -1.38
HMGB1P09429 AL138960.2-201ENST00000625145 535 ntBASIC6.43□□□□□ -1.38
HMGB1P09429 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMGB1P09429 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMGB1P09429 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6.43□□□□□ -1.38
HMGB1P09429 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGB1P09429 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMGB1P09429 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMGB1P09429 ELL2P4-201ENST00000446870 1376 ntBASIC6.43□□□□□ -1.38
HMGB1P09429 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.42□□□□□ -1.38
HMGB1P09429 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB1P09429 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.42□□□□□ -1.38
HMGB1P09429 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.42□□□□□ -1.38
HMGB1P09429 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB1P09429 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB1P09429 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
HMGB1P09429 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
HMGB1P09429 AC008079.2-201ENST00000623543 20396 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 AL031985.1-201ENST00000392713 418 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 RPL7P27-201ENST00000403775 720 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 RN7SKP286-201ENST00000410894 299 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 RPP40P1-201ENST00000426762 456 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 RPL7AP49-201ENST00000429522 581 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 RPS29P14-201ENST00000431518 171 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 AL591438.1-201ENST00000433508 581 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 AC011242.1-201ENST00000433596 1158 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 Z77249.1-201ENST00000444622 1175 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 AC073909.1-201ENST00000447112 999 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 AC105399.1-202ENST00000447303 205 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.42□□□□□ -1.38
HMGB1P09429 AC009963.2-201ENST00000453431 138 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 PPIAP19-201ENST00000486414 492 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 AC023424.1-201ENST00000496058 459 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 AC108145.1-201ENST00000503770 153 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.42□□□□□ -1.38
HMGB1P09429 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB1P09429 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.42□□□□□ -1.38
HMGB1P09429 RN7SKP99-201ENST00000517028 307 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 AP001207.1-201ENST00000524051 481 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB1P09429 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC6.42□□□□□ -1.38
HMGB1P09429 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.42□□□□□ -1.38
HMGB1P09429 RN7SL802P-201ENST00000577858 299 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC6.42□□□□□ -1.38
HMGB1P09429 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.42□□□□□ -1.38
HMGB1P09429 AC006116.7-201ENST00000590141 756 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.42□□□□□ -1.38
HMGB1P09429 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.42□□□□□ -1.38
HMGB1P09429 AP000864.1-201ENST00000609424 650 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 AC244107.2-201ENST00000611773 76 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 RNA5SP440-201ENST00000612665 119 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 MIR6861-201ENST00000618657 64 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 AL691477.1-201ENST00000624398 162 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB1P09429 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
HMGB1P09429 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB1P09429 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB1P09429 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.42□□□□□ -1.38
HMGB1P09429 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB1P09429 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB1P09429 AL031595.2-201ENST00000624215 19071 ntBASIC6.42□□□□□ -1.38
HMGB1P09429 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.41□□□□□ -1.38
HMGB1P09429 AC011978.2-201ENST00000569835 2054 ntBASIC6.41□□□□□ -1.38
HMGB1P09429 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms