Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC116553.2-201ENST00000564203 463 ntBASIC4.55□□□□□ -1.68
PRKNO60260 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.55□□□□□ -1.68
PRKNO60260 TVP23CP2-201ENST00000571473 623 ntBASIC4.55□□□□□ -1.68
PRKNO60260 MTATP6P24-201ENST00000576835 677 ntBASIC4.55□□□□□ -1.68
PRKNO60260 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.55□□□□□ -1.68
PRKNO60260 BNIP3P38-201ENST00000601117 544 ntBASIC4.55□□□□□ -1.68
PRKNO60260 AL606834.3-201ENST00000602615 496 ntBASIC4.55□□□□□ -1.68
PRKNO60260 AC025175.1-201ENST00000606482 759 ntBASIC4.55□□□□□ -1.68
PRKNO60260 AC116651.1-201ENST00000609724 556 ntBASIC4.55□□□□□ -1.68
PRKNO60260 AL049794.2-201ENST00000616301 365 ntBASIC4.55□□□□□ -1.68
PRKNO60260 RMST_10.1-201ENST00000616309 154 ntBASIC4.55□□□□□ -1.68
PRKNO60260 RPL23AP61-201ENST00000623642 466 ntBASIC4.55□□□□□ -1.68
PRKNO60260 AL078595.3-201ENST00000623815 1166 ntBASIC4.55□□□□□ -1.68
PRKNO60260 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.55□□□□□ -1.68
PRKNO60260 AC006927.2-201ENST00000639256 389 ntBASIC4.55□□□□□ -1.68
PRKNO60260 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.55□□□□□ -1.68
PRKNO60260 AP005435.3-201ENST00000531260 3198 ntBASIC4.55□□□□□ -1.68
PRKNO60260 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.55□□□□□ -1.68
PRKNO60260 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.55□□□□□ -1.68
PRKNO60260 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.55□□□□□ -1.68
PRKNO60260 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRKNO60260 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRKNO60260 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.55□□□□□ -1.68
PRKNO60260 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRKNO60260 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PRKNO60260 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
PRKNO60260 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PRKNO60260 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRKNO60260 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.54□□□□□ -1.68
PRKNO60260 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PRKNO60260 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.54□□□□□ -1.68
PRKNO60260 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.54□□□□□ -1.68
PRKNO60260 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.54□□□□□ -1.68
PRKNO60260 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PRKNO60260 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
PRKNO60260 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PRKNO60260 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
PRKNO60260 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PRKNO60260 SNORA73.1-201ENST00000363107 205 ntBASIC4.54□□□□□ -1.68
PRKNO60260 RNU5B-4P-201ENST00000363508 111 ntBASIC4.54□□□□□ -1.68
PRKNO60260 RNU6-207P-201ENST00000384137 107 ntBASIC4.54□□□□□ -1.68
PRKNO60260 RNU6-298P-201ENST00000390888 96 ntBASIC4.54□□□□□ -1.68
PRKNO60260 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.54□□□□□ -1.68
PRKNO60260 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PRKNO60260 RPA2P2-201ENST00000419698 796 ntBASIC4.54□□□□□ -1.68
PRKNO60260 AC093084.1-201ENST00000424233 687 ntBASIC4.54□□□□□ -1.68
PRKNO60260 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.54□□□□□ -1.68
PRKNO60260 MTCYBP15-201ENST00000433123 1127 ntBASIC4.54□□□□□ -1.68
PRKNO60260 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.54□□□□□ -1.68
PRKNO60260 AC093716.1-201ENST00000435923 377 ntBASIC4.54□□□□□ -1.68
PRKNO60260 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.54□□□□□ -1.68
PRKNO60260 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.54□□□□□ -1.68
PRKNO60260 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.54□□□□□ -1.68
PRKNO60260 HMGB1P5-202ENST00000451497 985 ntBASIC4.54□□□□□ -1.68
PRKNO60260 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.54□□□□□ -1.68
PRKNO60260 AC234781.3-201ENST00000452540 973 ntBASIC4.54□□□□□ -1.68
PRKNO60260 AL356981.1-201ENST00000454879 684 ntBASIC4.54□□□□□ -1.68
PRKNO60260 AC021660.1-201ENST00000465006 554 ntBASIC4.54□□□□□ -1.68
PRKNO60260 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.54□□□□□ -1.68
PRKNO60260 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.54□□□□□ -1.68
PRKNO60260 AC098862.1-201ENST00000504991 413 ntBASIC4.54□□□□□ -1.68
PRKNO60260 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.54□□□□□ -1.68
PRKNO60260 AC002456.2-201ENST00000509356 380 ntBASIC4.54□□□□□ -1.68
PRKNO60260 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.54□□□□□ -1.68
PRKNO60260 SNORA19.3-201ENST00000516165 130 ntBASIC4.54□□□□□ -1.68
PRKNO60260 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.54□□□□□ -1.68
PRKNO60260 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.54□□□□□ -1.68
PRKNO60260 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.54□□□□□ -1.68
PRKNO60260 EIF4A2P5-201ENST00000529914 499 ntBASIC4.54□□□□□ -1.68
PRKNO60260 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.54□□□□□ -1.68
PRKNO60260 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.54□□□□□ -1.68
PRKNO60260 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.54□□□□□ -1.68
PRKNO60260 PCNPP1-201ENST00000552501 511 ntBASIC4.54□□□□□ -1.68
PRKNO60260 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.54□□□□□ -1.68
PRKNO60260 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PRKNO60260 BGLT3-201ENST00000564523 994 ntBASIC4.54□□□□□ -1.68
PRKNO60260 AGGF1P5-201ENST00000567900 919 ntBASIC4.54□□□□□ -1.68
PRKNO60260 AC106734.1-201ENST00000568646 663 ntBASIC4.54□□□□□ -1.68
PRKNO60260 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.54□□□□□ -1.68
PRKNO60260 AC104687.2-201ENST00000604442 342 ntBASIC4.54□□□□□ -1.68
PRKNO60260 AC099785.1-201ENST00000605697 437 ntBASIC4.54□□□□□ -1.68
PRKNO60260 AC019131.2-201ENST00000609071 870 ntBASIC4.54□□□□□ -1.68
PRKNO60260 VN1R9P-201ENST00000614184 867 ntBASIC4.54□□□□□ -1.68
PRKNO60260 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.54□□□□□ -1.68
PRKNO60260 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.54□□□□□ -1.68
PRKNO60260 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.54□□□□□ -1.68
PRKNO60260 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.54□□□□□ -1.68
PRKNO60260 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.54□□□□□ -1.68
PRKNO60260 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.54□□□□□ -1.68
PRKNO60260 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.54□□□□□ -1.68
PRKNO60260 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.54□□□□□ -1.68
PRKNO60260 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PRKNO60260 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.54□□□□□ -1.68
PRKNO60260 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PRKNO60260 AC009643.2-201ENST00000603543 1448 ntBASIC4.54□□□□□ -1.68
PRKNO60260 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.54□□□□□ -1.68
PRKNO60260 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PRKNO60260 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.54□□□□□ -1.68
PRKNO60260 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PRKNO60260 AC107021.2-201ENST00000567714 2095 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms