Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.2□□□□□ -1.58
MSI1O43347 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MSI1O43347 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MSI1O43347 TRIM51GP-201ENST00000534741 1350 ntBASIC5.2□□□□□ -1.58
MSI1O43347 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.2□□□□□ -1.58
MSI1O43347 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
MSI1O43347 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MSI1O43347 MIR550A3-201ENST00000390735 95 ntBASIC5.2□□□□□ -1.58
MSI1O43347 AL603865.2-201ENST00000401679 213 ntBASIC5.2□□□□□ -1.58
MSI1O43347 RN7SKP216-201ENST00000411050 312 ntBASIC5.2□□□□□ -1.58
MSI1O43347 AC023128.2-201ENST00000420880 1223 ntBASIC5.2□□□□□ -1.58
MSI1O43347 VN1R54P-201ENST00000435210 1049 ntBASIC5.2□□□□□ -1.58
MSI1O43347 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.2□□□□□ -1.58
MSI1O43347 AL691482.1-201ENST00000453255 87 ntBASIC5.2□□□□□ -1.58
MSI1O43347 HMGB1P4-201ENST00000455362 567 ntBASIC5.2□□□□□ -1.58
MSI1O43347 AC008280.2-201ENST00000455473 307 ntBASIC5.2□□□□□ -1.58
MSI1O43347 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MSI1O43347 RPS20P4-201ENST00000461659 355 ntBASIC5.2□□□□□ -1.58
MSI1O43347 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.2□□□□□ -1.58
MSI1O43347 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.2□□□□□ -1.58
MSI1O43347 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MSI1O43347 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.2□□□□□ -1.58
MSI1O43347 AP001922.4-201ENST00000526967 290 ntBASIC5.2□□□□□ -1.58
MSI1O43347 AC087888.1-201ENST00000550884 1254 ntBASIC5.2□□□□□ -1.58
MSI1O43347 MTCYBP23-201ENST00000558717 1102 ntBASIC5.2□□□□□ -1.58
MSI1O43347 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.2□□□□□ -1.58
MSI1O43347 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
MSI1O43347 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.2□□□□□ -1.58
MSI1O43347 AC087783.2-201ENST00000605070 562 ntBASIC5.2□□□□□ -1.58
MSI1O43347 AC106052.1-201ENST00000608029 497 ntBASIC5.2□□□□□ -1.58
MSI1O43347 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.2□□□□□ -1.58
MSI1O43347 Mico1.1-201ENST00000611698 204 ntBASIC5.2□□□□□ -1.58
MSI1O43347 AC022079.2-201ENST00000619739 566 ntBASIC5.2□□□□□ -1.58
MSI1O43347 AC112694.2-201ENST00000623697 768 ntBASIC5.2□□□□□ -1.58
MSI1O43347 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
MSI1O43347 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MSI1O43347 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MSI1O43347 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MSI1O43347 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MSI1O43347 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MSI1O43347 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.2□□□□□ -1.58
MSI1O43347 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MSI1O43347 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MSI1O43347 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.2□□□□□ -1.58
MSI1O43347 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MSI1O43347 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MSI1O43347 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
MSI1O43347 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
MSI1O43347 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
MSI1O43347 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
MSI1O43347 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.19□□□□□ -1.58
MSI1O43347 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.19□□□□□ -1.58
MSI1O43347 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
MSI1O43347 RNU5B-1-201ENST00000363286 116 ntBASIC5.19□□□□□ -1.58
MSI1O43347 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
MSI1O43347 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
MSI1O43347 LRRC37BP1-201ENST00000398851 714 ntBASIC5.19□□□□□ -1.58
MSI1O43347 RPL21P67-201ENST00000402896 478 ntBASIC5.19□□□□□ -1.58
MSI1O43347 RPL5P19-201ENST00000404228 893 ntBASIC5.19□□□□□ -1.58
MSI1O43347 MTATP6P20-201ENST00000414147 562 ntBASIC5.19□□□□□ -1.58
MSI1O43347 RPL7P11-201ENST00000437586 658 ntBASIC5.19□□□□□ -1.58
MSI1O43347 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.19□□□□□ -1.58
MSI1O43347 AL358794.1-201ENST00000445689 381 ntBASIC5.19□□□□□ -1.58
MSI1O43347 AC004980.3-201ENST00000447046 365 ntBASIC5.19□□□□□ -1.58
MSI1O43347 MTND1P31-201ENST00000449206 961 ntBASIC5.19□□□□□ -1.58
MSI1O43347 AL096803.2-201ENST00000450032 677 ntBASIC5.19□□□□□ -1.58
MSI1O43347 RPS27AP16-201ENST00000492222 470 ntBASIC5.19□□□□□ -1.58
MSI1O43347 AC231760.1-201ENST00000498002 260 ntBASIC5.19□□□□□ -1.58
MSI1O43347 CDH12P2-201ENST00000504393 298 ntBASIC5.19□□□□□ -1.58
MSI1O43347 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.19□□□□□ -1.58
MSI1O43347 PRELID3BP5-201ENST00000508612 460 ntBASIC5.19□□□□□ -1.58
MSI1O43347 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.19□□□□□ -1.58
MSI1O43347 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.19□□□□□ -1.58
MSI1O43347 GCSHP4-201ENST00000538792 439 ntBASIC5.19□□□□□ -1.58
MSI1O43347 AC008033.2-201ENST00000542626 177 ntBASIC5.19□□□□□ -1.58
MSI1O43347 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.19□□□□□ -1.58
MSI1O43347 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.19□□□□□ -1.58
MSI1O43347 MTND3P12-201ENST00000559068 328 ntBASIC5.19□□□□□ -1.58
MSI1O43347 NDUFB4P11-201ENST00000560510 395 ntBASIC5.19□□□□□ -1.58
MSI1O43347 AC040958.1-201ENST00000561102 201 ntBASIC5.19□□□□□ -1.58
MSI1O43347 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.19□□□□□ -1.58
MSI1O43347 Z99289.3-201ENST00000605586 594 ntBASIC5.19□□□□□ -1.58
MSI1O43347 AC079395.3-201ENST00000615161 484 ntBASIC5.19□□□□□ -1.58
MSI1O43347 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.19□□□□□ -1.58
MSI1O43347 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MSI1O43347 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.19□□□□□ -1.58
MSI1O43347 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MSI1O43347 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.19□□□□□ -1.58
MSI1O43347 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.19□□□□□ -1.58
MSI1O43347 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.19□□□□□ -1.58
MSI1O43347 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MSI1O43347 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MSI1O43347 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MSI1O43347 AC116158.1-201ENST00000560231 2129 ntBASIC5.18□□□□□ -1.58
MSI1O43347 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.18□□□□□ -1.58
MSI1O43347 AL132640.2-201ENST00000559968 1698 ntBASIC5.18□□□□□ -1.58
MSI1O43347 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
MSI1O43347 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
MSI1O43347 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
MSI1O43347 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms