Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RPS14P8-201ENST00000478778 369 ntBASIC6.61□□□□□ -1.35
SOX1O00570 AC099521.1-201ENST00000482557 334 ntBASIC6.61□□□□□ -1.35
SOX1O00570 AC019235.1-201ENST00000503847 207 ntBASIC6.61□□□□□ -1.35
SOX1O00570 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.61□□□□□ -1.35
SOX1O00570 AC108078.1-201ENST00000508073 725 ntBASIC6.61□□□□□ -1.35
SOX1O00570 AC009646.1-201ENST00000510455 318 ntBASIC6.61□□□□□ -1.35
SOX1O00570 MTCYBP43-201ENST00000513621 740 ntBASIC6.61□□□□□ -1.35
SOX1O00570 MTCO2P4-201ENST00000517968 247 ntBASIC6.61□□□□□ -1.35
SOX1O00570 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC6.61□□□□□ -1.35
SOX1O00570 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
SOX1O00570 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.61□□□□□ -1.35
SOX1O00570 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.61□□□□□ -1.35
SOX1O00570 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.61□□□□□ -1.35
SOX1O00570 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC6.61□□□□□ -1.35
SOX1O00570 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
SOX1O00570 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC6.61□□□□□ -1.35
SOX1O00570 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC6.61□□□□□ -1.35
SOX1O00570 MIR4330-201ENST00000579077 105 ntBASIC6.61□□□□□ -1.35
SOX1O00570 FAM106CP-201ENST00000582212 507 ntBASIC6.61□□□□□ -1.35
SOX1O00570 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.61□□□□□ -1.35
SOX1O00570 AC005261.5-201ENST00000596280 355 ntBASIC6.61□□□□□ -1.35
SOX1O00570 AL161729.4-201ENST00000604650 476 ntBASIC6.61□□□□□ -1.35
SOX1O00570 AC008277.2-201ENST00000605196 797 ntBASIC6.61□□□□□ -1.35
SOX1O00570 FAM27E4-201ENST00000605259 342 ntBASIC6.61□□□□□ -1.35
SOX1O00570 RNU6-88P-201ENST00000606801 100 ntBASIC6.61□□□□□ -1.35
SOX1O00570 AL136131.3-201ENST00000607600 188 ntBASIC6.61□□□□□ -1.35
SOX1O00570 AC108479.2-201ENST00000617314 601 ntBASIC6.61□□□□□ -1.35
SOX1O00570 AC092650.2-201ENST00000619984 902 ntBASIC6.61□□□□□ -1.35
SOX1O00570 MRPL57P1-201ENST00000621486 265 ntBASIC6.61□□□□□ -1.35
SOX1O00570 AC079228.1-201ENST00000624774 1049 ntBASIC6.61□□□□□ -1.35
SOX1O00570 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SOX1O00570 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
SOX1O00570 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.61□□□□□ -1.35
SOX1O00570 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SOX1O00570 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
SOX1O00570 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
SOX1O00570 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SOX1O00570 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC6.61□□□□□ -1.35
SOX1O00570 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.61□□□□□ -1.35
SOX1O00570 AL034370.1-201ENST00000397254 1590 ntBASIC6.61□□□□□ -1.35
SOX1O00570 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.61□□□□□ -1.35
SOX1O00570 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.61□□□□□ -1.35
SOX1O00570 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SOX1O00570 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.6□□□□□ -1.35
SOX1O00570 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
SOX1O00570 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
SOX1O00570 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SOX1O00570 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.6□□□□□ -1.35
SOX1O00570 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SOX1O00570 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.6□□□□□ -1.35
SOX1O00570 AC006026.1-201ENST00000444025 1803 ntBASIC6.6□□□□□ -1.35
SOX1O00570 DCAF13P1-201ENST00000495256 1330 ntBASIC6.6□□□□□ -1.35
SOX1O00570 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.6□□□□□ -1.35
SOX1O00570 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SOX1O00570 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SOX1O00570 AL049634.1-201ENST00000453770 1720 ntBASIC6.6□□□□□ -1.35
SOX1O00570 U8.4-201ENST00000363626 134 ntBASIC6.6□□□□□ -1.35
SOX1O00570 EI24P3-201ENST00000399046 1062 ntBASIC6.6□□□□□ -1.35
SOX1O00570 AL589647.1-201ENST00000402485 466 ntBASIC6.6□□□□□ -1.35
SOX1O00570 RPL35AP3-201ENST00000414680 288 ntBASIC6.6□□□□□ -1.35
SOX1O00570 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
SOX1O00570 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.6□□□□□ -1.35
SOX1O00570 SKP1P3-201ENST00000429280 487 ntBASIC6.6□□□□□ -1.35
SOX1O00570 RPL7P29-201ENST00000437151 728 ntBASIC6.6□□□□□ -1.35
SOX1O00570 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SOX1O00570 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC6.6□□□□□ -1.35
SOX1O00570 AC093019.1-201ENST00000443135 252 ntBASIC6.6□□□□□ -1.35
SOX1O00570 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC6.6□□□□□ -1.35
SOX1O00570 BX248409.1-201ENST00000455497 255 ntBASIC6.6□□□□□ -1.35
SOX1O00570 RPS23P6-201ENST00000466136 431 ntBASIC6.6□□□□□ -1.35
SOX1O00570 HMGN1P12-201ENST00000499125 195 ntBASIC6.6□□□□□ -1.35
SOX1O00570 RNF138P1-201ENST00000502765 546 ntBASIC6.6□□□□□ -1.35
SOX1O00570 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.6□□□□□ -1.35
SOX1O00570 SSX8-201ENST00000506270 579 ntBASIC6.6□□□□□ -1.35
SOX1O00570 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC6.6□□□□□ -1.35
SOX1O00570 LRRC34P2-201ENST00000514850 553 ntBASIC6.6□□□□□ -1.35
SOX1O00570 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC6.6□□□□□ -1.35
SOX1O00570 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.6□□□□□ -1.35
SOX1O00570 AP002812.4-201ENST00000532139 286 ntBASIC6.6□□□□□ -1.35
SOX1O00570 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC6.6□□□□□ -1.35
SOX1O00570 BNIP3P8-201ENST00000597863 560 ntBASIC6.6□□□□□ -1.35
SOX1O00570 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SOX1O00570 AL359535.1-201ENST00000612100 1087 ntBASIC6.6□□□□□ -1.35
SOX1O00570 AL121612.2-201ENST00000612261 482 ntBASIC6.6□□□□□ -1.35
SOX1O00570 AL020991.1-201ENST00000612314 373 ntBASIC6.6□□□□□ -1.35
SOX1O00570 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC6.6□□□□□ -1.35
SOX1O00570 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SOX1O00570 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.6□□□□□ -1.35
SOX1O00570 AC117529.2-201ENST00000512159 2068 ntBASIC6.6□□□□□ -1.35
SOX1O00570 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SOX1O00570 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SOX1O00570 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SOX1O00570 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SOX1O00570 SPATA31C1-201ENST00000420021 3895 ntBASIC6.6□□□□□ -1.35
SOX1O00570 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SOX1O00570 AL021877.2-201ENST00000624442 10684 ntBASIC6.6□□□□□ -1.35
SOX1O00570 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SOX1O00570 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.59□□□□□ -1.35
SOX1O00570 AC093278.2-201ENST00000564956 2485 ntBASIC6.59□□□□□ -1.35
SOX1O00570 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms