Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UPK1AO00322 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
UPK1AO00322 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.17□□□□□ -1.74
UPK1AO00322 AC245100.2-201ENST00000454544 1679 ntBASIC4.17□□□□□ -1.74
UPK1AO00322 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.17□□□□□ -1.74
UPK1AO00322 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.17□□□□□ -1.74
UPK1AO00322 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
UPK1AO00322 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
UPK1AO00322 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
UPK1AO00322 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
UPK1AO00322 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.17□□□□□ -1.74
UPK1AO00322 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
UPK1AO00322 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.17□□□□□ -1.74
UPK1AO00322 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.17□□□□□ -1.74
UPK1AO00322 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UPK1AO00322 AC004552.1-201ENST00000419089 348 ntBASIC4.17□□□□□ -1.74
UPK1AO00322 PTP4A1P1-201ENST00000420539 515 ntBASIC4.17□□□□□ -1.74
UPK1AO00322 UQCRBP1-201ENST00000421129 336 ntBASIC4.17□□□□□ -1.74
UPK1AO00322 PRELID3BP10-201ENST00000431957 584 ntBASIC4.17□□□□□ -1.74
UPK1AO00322 SNRPFP2-201ENST00000440710 251 ntBASIC4.17□□□□□ -1.74
UPK1AO00322 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.17□□□□□ -1.74
UPK1AO00322 DDX39BP2-208ENST00000453923 258 ntBASIC4.17□□□□□ -1.74
UPK1AO00322 RPS26P3-201ENST00000470205 348 ntBASIC4.17□□□□□ -1.74
UPK1AO00322 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UPK1AO00322 AC090543.2-201ENST00000483963 348 ntBASIC4.17□□□□□ -1.74
UPK1AO00322 AC004057.1-201ENST00000485827 348 ntBASIC4.17□□□□□ -1.74
UPK1AO00322 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.17□□□□□ -1.74
UPK1AO00322 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.17□□□□□ -1.74
UPK1AO00322 RNA5SP497-201ENST00000516081 97 ntBASIC4.17□□□□□ -1.74
UPK1AO00322 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.17□□□□□ -1.74
UPK1AO00322 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.17□□□□□ -1.74
UPK1AO00322 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.17□□□□□ -1.74
UPK1AO00322 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.17□□□□□ -1.74
UPK1AO00322 AP005119.2-201ENST00000579735 1105 ntBASIC4.17□□□□□ -1.74
UPK1AO00322 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.17□□□□□ -1.74
UPK1AO00322 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.17□□□□□ -1.74
UPK1AO00322 MIR6891-201ENST00000618788 93 ntBASIC4.17□□□□□ -1.74
UPK1AO00322 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.17□□□□□ -1.74
UPK1AO00322 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UPK1AO00322 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UPK1AO00322 AP001005.3-201ENST00000622049 129 ntBASIC4.17□□□□□ -1.74
UPK1AO00322 MIR6730-201ENST00000622213 67 ntBASIC4.17□□□□□ -1.74
UPK1AO00322 AC007546.2-201ENST00000623996 360 ntBASIC4.17□□□□□ -1.74
UPK1AO00322 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.17□□□□□ -1.74
UPK1AO00322 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UPK1AO00322 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UPK1AO00322 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
UPK1AO00322 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UPK1AO00322 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
UPK1AO00322 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
UPK1AO00322 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.17□□□□□ -1.74
UPK1AO00322 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.17□□□□□ -1.74
UPK1AO00322 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
UPK1AO00322 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.16□□□□□ -1.74
UPK1AO00322 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.16□□□□□ -1.74
UPK1AO00322 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
UPK1AO00322 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.16□□□□□ -1.74
UPK1AO00322 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
UPK1AO00322 OR52B1P-201ENST00000316506 909 ntBASIC4.16□□□□□ -1.74
UPK1AO00322 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
UPK1AO00322 GLULP6-201ENST00000399502 913 ntBASIC4.16□□□□□ -1.74
UPK1AO00322 AL590139.1-201ENST00000416267 400 ntBASIC4.16□□□□□ -1.74
UPK1AO00322 ARAFP1-201ENST00000422172 605 ntBASIC4.16□□□□□ -1.74
UPK1AO00322 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.16□□□□□ -1.74
UPK1AO00322 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
UPK1AO00322 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.16□□□□□ -1.74
UPK1AO00322 HMGB3P9-201ENST00000441799 583 ntBASIC4.16□□□□□ -1.74
UPK1AO00322 AC017007.3-201ENST00000479865 435 ntBASIC4.16□□□□□ -1.74
UPK1AO00322 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
UPK1AO00322 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.16□□□□□ -1.74
UPK1AO00322 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.16□□□□□ -1.74
UPK1AO00322 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.16□□□□□ -1.74
UPK1AO00322 OR1AB1P-201ENST00000585564 761 ntBASIC4.16□□□□□ -1.74
UPK1AO00322 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.16□□□□□ -1.74
UPK1AO00322 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.16□□□□□ -1.74
UPK1AO00322 VN1R81P-201ENST00000602085 372 ntBASIC4.16□□□□□ -1.74
UPK1AO00322 AC005034.4-201ENST00000603612 899 ntBASIC4.16□□□□□ -1.74
UPK1AO00322 MIR432-201ENST00000606207 94 ntBASIC4.16□□□□□ -1.74
UPK1AO00322 LINC00901.1-201ENST00000617252 152 ntBASIC4.16□□□□□ -1.74
UPK1AO00322 AC074276.2-201ENST00000619891 348 ntBASIC4.16□□□□□ -1.74
UPK1AO00322 MIR7703-201ENST00000620784 77 ntBASIC4.16□□□□□ -1.74
UPK1AO00322 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.16□□□□□ -1.74
UPK1AO00322 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
UPK1AO00322 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.16□□□□□ -1.74
UPK1AO00322 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.16□□□□□ -1.74
UPK1AO00322 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.16□□□□□ -1.74
UPK1AO00322 A2MP1-204ENST00000566278 4130 ntBASIC4.16□□□□□ -1.74
UPK1AO00322 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
UPK1AO00322 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
UPK1AO00322 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
UPK1AO00322 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
UPK1AO00322 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
UPK1AO00322 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.15□□□□□ -1.74
UPK1AO00322 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
UPK1AO00322 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
UPK1AO00322 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
UPK1AO00322 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
UPK1AO00322 AC103591.2-201ENST00000265259 766 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
UPK1AO00322 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms