Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGB1Q9Y5G3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 DHX9P1-201ENST00000436565 3076 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 MRE11P1-201ENST00000464884 2127 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AC109780.1-201ENST00000451768 1344 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 MIR365B-201ENST00000362317 111 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 RNU4-2-201ENST00000365668 141 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 RNU6-207P-201ENST00000384137 107 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 RNU6-481P-201ENST00000384194 107 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 RNU6-796P-201ENST00000391086 107 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 RPL5P19-201ENST00000404228 893 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 U3.32-201ENST00000408116 212 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 RN7SKP59-201ENST00000410520 314 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AL158825.1-201ENST00000414735 521 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 MTCYBP29-201ENST00000436327 1006 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 TMX2P1-201ENST00000436507 708 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AC245517.2-201ENST00000442890 346 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 LRRC37A14P-201ENST00000452297 462 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 VDAC2P4-201ENST00000452925 711 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AL356981.1-201ENST00000454879 684 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AC011225.1-201ENST00000457751 369 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AC016687.1-201ENST00000482574 353 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AC093270.2-201ENST00000486157 792 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AC108693.1-201ENST00000496068 432 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AC015864.1-201ENST00000496512 544 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 HMGB1P3-201ENST00000502802 616 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AK4P6-201ENST00000505168 528 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AC074087.1-201ENST00000512059 724 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 MTCO3P28-201ENST00000513351 515 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 BX510359.5-201ENST00000515651 304 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 RNU6-311P-201ENST00000516224 102 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 MRPS36P3-201ENST00000519284 130 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AL109741.3-201ENST00000561748 592 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AC015802.2-201ENST00000589690 189 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AC005034.4-201ENST00000603612 899 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AC079880.2-201ENST00000603790 1213 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AC099785.1-201ENST00000605697 437 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AC245008.1-201ENST00000608123 476 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 MTND4P8-201ENST00000514997 1362 ntBASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGB1Q9Y5G3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 NEAT1-202ENST00000501122 22743 ntBASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 AL133268.1-201ENST00000405676 1401 ntBASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 RNU5B-4P-201ENST00000363508 111 ntBASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 AP000580.1-201ENST00000404439 358 ntBASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 Y_RNA.625-201ENST00000411256 107 ntBASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 AL445183.3-201ENST00000414168 502 ntBASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 FABP7P2-201ENST00000429946 379 ntBASIC4.75□□□□□ -1.65
PCDHGB1Q9Y5G3 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms