Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 UBA52P3-201ENST00000491303 382 ntBASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 AC113430.1-201ENST00000506872 718 ntBASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 AC007016.1-201ENST00000512110 244 ntBASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 AC015795.1-201ENST00000513669 327 ntBASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 RNA5SP360-201ENST00000516555 118 ntBASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 AC025423.2-201ENST00000537570 439 ntBASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 FKBP1BP1-201ENST00000553366 325 ntBASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 PARP1P2-201ENST00000556806 195 ntBASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 AC087477.6-201ENST00000559595 843 ntBASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 VN1R81P-201ENST00000602085 372 ntBASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 AC005191.1-201ENST00000603950 358 ntBASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 LINC00901.1-201ENST00000617252 152 ntBASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 AC015908.5-201ENST00000623289 343 ntBASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 AC107068.1-201ENST00000563286 4218 ntBASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.56□□□□□ -1.68
APOBEC3BQ9UH17 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 AL356317.1-201ENST00000396110 1436 ntBASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 RAD17P1-201ENST00000418130 2042 ntBASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 AC068538.1-201ENST00000376856 336 ntBASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 U3.35-201ENST00000408405 208 ntBASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 RNU4-25P-201ENST00000410569 230 ntBASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 AC009302.1-201ENST00000417147 390 ntBASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 AL592293.2-201ENST00000422292 996 ntBASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 CHIAP3-201ENST00000423668 1133 ntBASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 CKS1BP6-201ENST00000424932 240 ntBASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 AL732292.1-201ENST00000426692 226 ntBASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 NDUFA5P1-201ENST00000433858 341 ntBASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 APOOP2-201ENST00000461561 539 ntBASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 AC068587.1-201ENST00000483613 781 ntBASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 AC098799.3-201ENST00000506095 438 ntBASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 AC022882.1-201ENST00000532142 501 ntBASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 AC011270.1-201ENST00000558606 583 ntBASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 AC067838.1-201ENST00000606064 577 ntBASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 AL023881.1-201ENST00000621088 301 ntBASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 THAP12P5-201ENST00000405864 2275 ntBASIC4.55□□□□□ -1.68
APOBEC3BQ9UH17 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
APOBEC3BQ9UH17 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
APOBEC3BQ9UH17 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.54□□□□□ -1.68
APOBEC3BQ9UH17 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.54□□□□□ -1.68
APOBEC3BQ9UH17 AP001642.1-201ENST00000624727 2117 ntBASIC4.54□□□□□ -1.68
APOBEC3BQ9UH17 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
APOBEC3BQ9UH17 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
APOBEC3BQ9UH17 FAM3C2-201ENST00000312214 681 ntBASIC4.54□□□□□ -1.68
APOBEC3BQ9UH17 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
APOBEC3BQ9UH17 OR1F12-201ENST00000402365 945 ntBASIC4.54□□□□□ -1.68
APOBEC3BQ9UH17 ARL4AP5-201ENST00000404372 599 ntBASIC4.54□□□□□ -1.68
APOBEC3BQ9UH17 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
APOBEC3BQ9UH17 AL358176.3-201ENST00000420757 454 ntBASIC4.54□□□□□ -1.68
APOBEC3BQ9UH17 HMGB3P10-201ENST00000434734 572 ntBASIC4.54□□□□□ -1.68
APOBEC3BQ9UH17 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms