Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC245014.3-201ENST00000618589 347 ntBASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 AC078938.1-201ENST00000620993 318 ntBASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 XIST-206ENST00000434839 2865 ntTSL 5 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 THAP12P6-201ENST00000431978 2310 ntBASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 ZNF215-202ENST00000414517 3257 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 RNA5SP110-201ENST00000362638 115 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 Y_RNA.112-201ENST00000363250 102 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 RNA5SP333-201ENST00000363466 118 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 RNA5SP334-201ENST00000364825 118 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 AL354890.1-201ENST00000413730 346 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 AC005033.1-201ENST00000428904 813 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 AC023141.3-201ENST00000436698 278 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 PPP1R2P5-201ENST00000457256 603 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 AC068587.1-201ENST00000483613 781 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 VN1R104P-201ENST00000505115 1009 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 KHDC1P1-201ENST00000511053 508 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 AC105031.1-201ENST00000518550 476 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 AP004607.2-201ENST00000533949 322 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 AL121594.2-201ENST00000541658 472 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 ARHGAP42P5-201ENST00000548856 2936 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 RN7SL178P-201ENST00000582930 304 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 AC010525.2-201ENST00000590920 195 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 AC048344.3-201ENST00000605512 251 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 AC004908.1-201ENST00000606572 541 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 RPSAP73-201ENST00000614820 330 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 uc_338.18-201ENST00000615451 175 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 RMST_9.1-201ENST00000619945 193 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 AC138627.2-201ENST00000624202 601 ntBASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 DGKG-202ENST00000344484 3445 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
COL25A1Q9BXS0 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms