Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 DNAJC19P8-201ENST00000452887 259 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 RN7SL51P-201ENST00000468230 285 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AC100832.1-201ENST00000471945 383 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AC096741.1-201ENST00000472250 846 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AP000797.2-201ENST00000475768 606 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AC037198.2-201ENST00000478845 733 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AC073522.1-201ENST00000483312 377 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AC093755.1-201ENST00000512950 1023 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 SCARNA16.4-201ENST00000516956 187 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 IGKV2-18-201ENST00000522607 343 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AC027026.1-201ENST00000532323 742 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 OR8G3P-201ENST00000533406 921 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 ELOCP32-201ENST00000548625 324 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AC090888.1-201ENST00000561335 1141 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AC007225.2-201ENST00000562529 256 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AC002400.1-201ENST00000569310 726 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 VN1R88P-201ENST00000596787 292 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 Z95327.3-201ENST00000610385 572 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AC107075.1-201ENST00000613695 314 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AL392048.1-201ENST00000613946 534 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 MIR8080-201ENST00000622224 89 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 VPS35P1-201ENST00000563400 1518 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 MRRFP1-201ENST00000435941 1675 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC093311.1-201ENST00000506586 2021 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 RNA5SP335-201ENST00000363817 110 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 OR52E6-202ENST00000379946 954 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 SNORA70.6-201ENST00000383934 134 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 SNORA11C-201ENST00000408532 129 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 RNU6-77P-201ENST00000410554 91 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 MTND1P32-201ENST00000433043 938 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 GSTM5P1-201ENST00000434751 660 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 HMGB1P45-201ENST00000435986 653 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 ARL4AP3-201ENST00000441452 574 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 UBE2D3P4-201ENST00000441973 436 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 MTND5P2-201ENST00000442927 1142 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC016772.1-201ENST00000444170 1261 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 GAPDHP25-201ENST00000447061 1001 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AL606490.1-201ENST00000452266 765 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 RPS26P39-201ENST00000469206 341 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC092754.1-201ENST00000472975 479 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 OR5BM1P-201ENST00000512021 366 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC097486.1-201ENST00000515331 210 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 RN7SKP99-201ENST00000517028 307 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms