Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 NPM1P42-201ENST00000560329 862 ntBASIC7.36□□□□□ -1.23
HLA-CQ95604 AC022884.3-201ENST00000579571 248 ntBASIC7.36□□□□□ -1.23
HLA-CQ95604 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.36□□□□□ -1.23
HLA-CQ95604 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC7.36□□□□□ -1.23
HLA-CQ95604 AC009237.17-201ENST00000618111 748 ntBASIC7.36□□□□□ -1.23
HLA-CQ95604 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
HLA-CQ95604 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.36□□□□□ -1.23
HLA-CQ95604 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.36□□□□□ -1.23
HLA-CQ95604 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC7.36□□□□□ -1.23
HLA-CQ95604 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-CQ95604 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
HLA-CQ95604 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-CQ95604 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-CQ95604 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC7.36□□□□□ -1.23
HLA-CQ95604 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
HLA-CQ95604 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-CQ95604 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.36□□□□□ -1.23
HLA-CQ95604 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.36□□□□□ -1.23
HLA-CQ95604 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-CQ95604 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-CQ95604 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-CQ95604 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.36□□□□□ -1.23
HLA-CQ95604 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-CQ95604 AP004289.2-201ENST00000444413 1457 ntBASIC7.36□□□□□ -1.23
HLA-CQ95604 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.36□□□□□ -1.23
HLA-CQ95604 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-CQ95604 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-CQ95604 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-CQ95604 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-CQ95604 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-CQ95604 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.35□□□□□ -1.23
HLA-CQ95604 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.35□□□□□ -1.23
HLA-CQ95604 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-CQ95604 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-CQ95604 AC007938.1-201ENST00000562524 2902 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 ELL2P4-201ENST00000446870 1376 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.35□□□□□ -1.23
HLA-CQ95604 AC022031.1-201ENST00000585985 2593 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-CQ95604 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-CQ95604 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-CQ95604 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.35□□□□□ -1.23
HLA-CQ95604 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-CQ95604 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
HLA-CQ95604 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.35□□□□□ -1.23
HLA-CQ95604 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
HLA-CQ95604 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC7.35□□□□□ -1.23
HLA-CQ95604 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
HLA-CQ95604 BMPR1APS1-201ENST00000403332 1598 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-CQ95604 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-CQ95604 AOX2P-204ENST00000487742 3284 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-CQ95604 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-CQ95604 RNU4-48P-201ENST00000365559 182 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.35□□□□□ -1.23
HLA-CQ95604 RN7SKP229-201ENST00000410465 302 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 RN7SKP254-201ENST00000410685 310 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.35□□□□□ -1.23
HLA-CQ95604 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.35□□□□□ -1.23
HLA-CQ95604 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC7.35□□□□□ -1.23
HLA-CQ95604 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC7.35□□□□□ -1.23
HLA-CQ95604 AC099782.1-201ENST00000425889 474 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.35□□□□□ -1.23
HLA-CQ95604 RPS20P32-201ENST00000456044 356 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 RNU6-1208P-201ENST00000459588 107 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 PABPC1P3-201ENST00000469174 459 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 RPL23AP11-201ENST00000475260 469 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.35□□□□□ -1.23
HLA-CQ95604 RNU6-488P-201ENST00000515918 99 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 RNU6-864P-201ENST00000516256 108 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 RNA5SP441-201ENST00000516809 88 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC7.35□□□□□ -1.23
HLA-CQ95604 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC7.35□□□□□ -1.23
HLA-CQ95604 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.35□□□□□ -1.23
HLA-CQ95604 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.35□□□□□ -1.23
HLA-CQ95604 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.35□□□□□ -1.23
HLA-CQ95604 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.35□□□□□ -1.23
HLA-CQ95604 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.35□□□□□ -1.23
HLA-CQ95604 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.35□□□□□ -1.23
HLA-CQ95604 AC092332.1-201ENST00000563684 829 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC7.35□□□□□ -1.23
HLA-CQ95604 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.35□□□□□ -1.23
HLA-CQ95604 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC7.35□□□□□ -1.23
HLA-CQ95604 VN1R84P-201ENST00000593697 235 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC7.35□□□□□ -1.23
HLA-CQ95604 AL022099.1-201ENST00000604551 712 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 AC008555.7-201ENST00000605008 583 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC7.35□□□□□ -1.23
HLA-CQ95604 AC090510.2-201ENST00000617465 629 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 AC099494.2-201ENST00000623371 978 ntBASIC7.35□□□□□ -1.23
HLA-CQ95604 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.35□□□□□ -1.23
HLA-CQ95604 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.35□□□□□ -1.23
HLA-CQ95604 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
HLA-CQ95604 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-CQ95604 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-CQ95604 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC7.35□□□□□ -1.23
HLA-CQ95604 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms