Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 YWHAEP5-201ENST00000431545 765 ntBASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 PRELID3BP10-201ENST00000431957 584 ntBASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 RNU7-157P-201ENST00000459600 66 ntBASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 RPL7P16-201ENST00000479738 738 ntBASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 AC084759.1-201ENST00000561168 290 ntBASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 VN2R3P-201ENST00000422626 1412 ntBASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 AL672167.2-201ENST00000377164 879 ntBASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 GAPDHP15-201ENST00000398586 975 ntBASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 SNORA79B-201ENST00000410557 148 ntBASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 SNORA74C-2-201ENST00000411179 201 ntBASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 USP9YP9-201ENST00000429406 715 ntBASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 ELOCP8-201ENST00000439309 332 ntBASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 ELOCP15-201ENST00000442090 332 ntBASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 DDX39BP2-208ENST00000453923 258 ntBASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 AURKAPS2-201ENST00000454983 333 ntBASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 AC079804.1-201ENST00000461922 436 ntBASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 RPL37AP8-201ENST00000494116 276 ntBASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 UBTFL9-201ENST00000534504 1148 ntBASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 RPL23AP97-201ENST00000568955 471 ntBASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 BPIFA4P-203ENST00000603168 689 ntBASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 AC027228.2-201ENST00000567141 2154 ntBASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC112Q8NEF3 AC139769.1-204ENST00000472297 1931 ntBASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 MAPK10-253ENST00000641010 4072 ntBASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 ATP5F1P2-201ENST00000398143 760 ntBASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 RN7SKP267-201ENST00000410381 285 ntBASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 TRIM60P17-201ENST00000415181 719 ntBASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 RPS23P10-201ENST00000416185 486 ntBASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 AC245028.1-201ENST00000423259 256 ntBASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 HMGB3P9-201ENST00000441799 583 ntBASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 AC006463.2-201ENST00000473326 348 ntBASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 RPS26P15-201ENST00000488067 348 ntBASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 RPL36AP41-201ENST00000493820 306 ntBASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 AC092111.2-201ENST00000611627 1414 ntBASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 AC233309.1-201ENST00000619522 751 ntBASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 AC007546.2-201ENST00000623996 360 ntBASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 SDAD1P1-202ENST00000524156 2051 ntBASIC4.93□□□□□ -1.62
CCDC112Q8NEF3 KARSP3-201ENST00000571212 1504 ntBASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 AC136624.1-201ENST00000400791 413 ntBASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 JKAMPP1-201ENST00000413804 919 ntBASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 CHEK2P3-201ENST00000416118 248 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms