Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COPB1P53618 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COPB1P53618 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.48□□□□□ -1.53
COPB1P53618 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
COPB1P53618 SNORA73.1-201ENST00000363107 205 ntBASIC5.48□□□□□ -1.53
COPB1P53618 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COPB1P53618 MIR937-201ENST00000401271 86 ntBASIC5.48□□□□□ -1.53
COPB1P53618 MTCO2P31-201ENST00000402702 684 ntBASIC5.48□□□□□ -1.53
COPB1P53618 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.48□□□□□ -1.53
COPB1P53618 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.48□□□□□ -1.53
COPB1P53618 AL445213.1-201ENST00000412589 747 ntBASIC5.48□□□□□ -1.53
COPB1P53618 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.48□□□□□ -1.53
COPB1P53618 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.48□□□□□ -1.53
COPB1P53618 RPL35AP24-201ENST00000413846 330 ntBASIC5.48□□□□□ -1.53
COPB1P53618 XKRYP4-201ENST00000414395 483 ntBASIC5.48□□□□□ -1.53
COPB1P53618 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.48□□□□□ -1.53
COPB1P53618 AC008173.1-201ENST00000418901 264 ntBASIC5.48□□□□□ -1.53
COPB1P53618 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.48□□□□□ -1.53
COPB1P53618 OSTCP5-201ENST00000425293 453 ntBASIC5.48□□□□□ -1.53
COPB1P53618 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.48□□□□□ -1.53
COPB1P53618 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.48□□□□□ -1.53
COPB1P53618 AL353898.1-201ENST00000444055 238 ntBASIC5.48□□□□□ -1.53
COPB1P53618 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COPB1P53618 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.48□□□□□ -1.53
COPB1P53618 XKRYP5-201ENST00000449659 483 ntBASIC5.48□□□□□ -1.53
COPB1P53618 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.48□□□□□ -1.53
COPB1P53618 RPL7P39-201ENST00000481157 744 ntBASIC5.48□□□□□ -1.53
COPB1P53618 AC116562.1-201ENST00000485355 781 ntBASIC5.48□□□□□ -1.53
COPB1P53618 RPL5P23-201ENST00000496040 868 ntBASIC5.48□□□□□ -1.53
COPB1P53618 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.48□□□□□ -1.53
COPB1P53618 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.48□□□□□ -1.53
COPB1P53618 OR10G5P-201ENST00000532733 358 ntBASIC5.48□□□□□ -1.53
COPB1P53618 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.48□□□□□ -1.53
COPB1P53618 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.48□□□□□ -1.53
COPB1P53618 AC091515.1-201ENST00000548110 679 ntBASIC5.48□□□□□ -1.53
COPB1P53618 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.48□□□□□ -1.53
COPB1P53618 OR4U1P-201ENST00000554958 912 ntBASIC5.48□□□□□ -1.53
COPB1P53618 AC044860.2-201ENST00000561005 179 ntBASIC5.48□□□□□ -1.53
COPB1P53618 AC027455.1-201ENST00000574104 594 ntBASIC5.48□□□□□ -1.53
COPB1P53618 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.48□□□□□ -1.53
COPB1P53618 MTCO2P22-201ENST00000603246 681 ntBASIC5.48□□□□□ -1.53
COPB1P53618 AC002487.1-201ENST00000604565 994 ntBASIC5.48□□□□□ -1.53
COPB1P53618 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.48□□□□□ -1.53
COPB1P53618 AL451064.1-201ENST00000607718 471 ntBASIC5.48□□□□□ -1.53
COPB1P53618 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.48□□□□□ -1.53
COPB1P53618 MIR6719-201ENST00000622428 87 ntBASIC5.48□□□□□ -1.53
COPB1P53618 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.48□□□□□ -1.53
COPB1P53618 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
COPB1P53618 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
COPB1P53618 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
COPB1P53618 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COPB1P53618 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.48□□□□□ -1.53
COPB1P53618 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.48□□□□□ -1.53
COPB1P53618 SCARNA15-201ENST00000607520 4325 ntBASIC5.47□□□□□ -1.53
COPB1P53618 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COPB1P53618 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COPB1P53618 AC012321.1-201ENST00000561622 1588 ntBASIC5.47□□□□□ -1.53
COPB1P53618 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COPB1P53618 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.47□□□□□ -1.53
COPB1P53618 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COPB1P53618 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.47□□□□□ -1.53
COPB1P53618 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COPB1P53618 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
COPB1P53618 MTHFD2P5-201ENST00000320415 844 ntBASIC5.47□□□□□ -1.53
COPB1P53618 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COPB1P53618 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COPB1P53618 SNORA70.10-201ENST00000384515 134 ntBASIC5.47□□□□□ -1.53
COPB1P53618 RNY3P9-201ENST00000384727 106 ntBASIC5.47□□□□□ -1.53
COPB1P53618 HMGB1P10-201ENST00000395823 563 ntBASIC5.47□□□□□ -1.53
COPB1P53618 EI24P3-201ENST00000399046 1062 ntBASIC5.47□□□□□ -1.53
COPB1P53618 RPL26P37-201ENST00000411983 438 ntBASIC5.47□□□□□ -1.53
COPB1P53618 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.47□□□□□ -1.53
COPB1P53618 SLC35E1P1-201ENST00000419313 864 ntBASIC5.47□□□□□ -1.53
COPB1P53618 PNRC2P1-201ENST00000423940 420 ntBASIC5.47□□□□□ -1.53
COPB1P53618 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COPB1P53618 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.47□□□□□ -1.53
COPB1P53618 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.47□□□□□ -1.53
COPB1P53618 RPL7P34-201ENST00000433316 712 ntBASIC5.47□□□□□ -1.53
COPB1P53618 USP9YP24-201ENST00000434374 697 ntBASIC5.47□□□□□ -1.53
COPB1P53618 MTCYBP29-201ENST00000436327 1006 ntBASIC5.47□□□□□ -1.53
COPB1P53618 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.47□□□□□ -1.53
COPB1P53618 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.47□□□□□ -1.53
COPB1P53618 USP9YP17-201ENST00000444617 696 ntBASIC5.47□□□□□ -1.53
COPB1P53618 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.47□□□□□ -1.53
COPB1P53618 AL591473.1-201ENST00000464297 313 ntBASIC5.47□□□□□ -1.53
COPB1P53618 AC134050.1-201ENST00000495088 933 ntBASIC5.47□□□□□ -1.53
COPB1P53618 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.47□□□□□ -1.53
COPB1P53618 AC010350.1-201ENST00000504908 231 ntBASIC5.47□□□□□ -1.53
COPB1P53618 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.47□□□□□ -1.53
COPB1P53618 AC113420.1-201ENST00000507903 571 ntBASIC5.47□□□□□ -1.53
COPB1P53618 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.47□□□□□ -1.53
COPB1P53618 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COPB1P53618 AC147055.3-201ENST00000510547 851 ntBASIC5.47□□□□□ -1.53
COPB1P53618 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.47□□□□□ -1.53
COPB1P53618 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.47□□□□□ -1.53
COPB1P53618 OR10V3P-201ENST00000525712 725 ntBASIC5.47□□□□□ -1.53
COPB1P53618 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.47□□□□□ -1.53
COPB1P53618 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COPB1P53618 DUXAP3-201ENST00000603616 594 ntBASIC5.47□□□□□ -1.53
COPB1P53618 AC104687.2-201ENST00000604442 342 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms