Protein–RNA interactions for Protein: P23467

PTPRB, Receptor-type tyrosine-protein phosphatase beta, humanhuman

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRBP23467 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPRBP23467 PCNPP4-201ENST00000414817 517 ntBASIC4.18□□□□□ -1.74
PTPRBP23467 KRR1P1-201ENST00000419430 803 ntBASIC4.18□□□□□ -1.74
PTPRBP23467 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTPRBP23467 MRPL50P1-201ENST00000431951 384 ntBASIC4.18□□□□□ -1.74
PTPRBP23467 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPRBP23467 RPL7P15-201ENST00000461190 712 ntBASIC4.18□□□□□ -1.74
PTPRBP23467 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPRBP23467 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPRBP23467 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTPRBP23467 RN7SL339P-201ENST00000580597 296 ntBASIC4.18□□□□□ -1.74
PTPRBP23467 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPRBP23467 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
PTPRBP23467 AL078595.2-201ENST00000605309 1780 ntBASIC4.18□□□□□ -1.74
PTPRBP23467 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPRBP23467 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPRBP23467 AL592182.3-201ENST00000642132 3304 ntBASIC4.18□□□□□ -1.74
PTPRBP23467 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPRBP23467 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
PTPRBP23467 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PTPRBP23467 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPRBP23467 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC4.18□□□□□ -1.74
PTPRBP23467 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPRBP23467 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPRBP23467 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPRBP23467 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
PTPRBP23467 U3.35-201ENST00000408405 208 ntBASIC4.18□□□□□ -1.74
PTPRBP23467 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPRBP23467 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPRBP23467 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPRBP23467 HMGN2P27-201ENST00000427352 270 ntBASIC4.18□□□□□ -1.74
PTPRBP23467 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPRBP23467 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.18□□□□□ -1.74
PTPRBP23467 AC099522.1-202ENST00000514718 367 ntBASIC4.18□□□□□ -1.74
PTPRBP23467 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPRBP23467 GTF2IP22-201ENST00000554443 182 ntBASIC4.18□□□□□ -1.74
PTPRBP23467 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPRBP23467 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPRBP23467 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.18□□□□□ -1.74
PTPRBP23467 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PTPRBP23467 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPRBP23467 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPRBP23467 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTPRBP23467 AL731532.2-201ENST00000623542 1953 ntBASIC4.18□□□□□ -1.74
PTPRBP23467 Z95331.1-201ENST00000623075 23112 ntBASIC4.18□□□□□ -1.74
PTPRBP23467 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPRBP23467 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.17□□□□□ -1.74
PTPRBP23467 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTPRBP23467 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTPRBP23467 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPRBP23467 OR51H2P-202ENST00000641424 3046 ntBASIC4.17□□□□□ -1.74
PTPRBP23467 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.17□□□□□ -1.74
PTPRBP23467 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PTPRBP23467 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PTPRBP23467 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PTPRBP23467 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
PTPRBP23467 CKS1BP6-201ENST00000424932 240 ntBASIC4.17□□□□□ -1.74
PTPRBP23467 AC012671.1-201ENST00000451912 203 ntBASIC4.17□□□□□ -1.74
PTPRBP23467 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.17□□□□□ -1.74
PTPRBP23467 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.17□□□□□ -1.74
PTPRBP23467 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPRBP23467 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC4.17□□□□□ -1.74
PTPRBP23467 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.17□□□□□ -1.74
PTPRBP23467 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.17□□□□□ -1.74
PTPRBP23467 AC010503.3-201ENST00000594355 540 ntBASIC4.17□□□□□ -1.74
PTPRBP23467 AC006272.2-201ENST00000594725 163 ntBASIC4.17□□□□□ -1.74
PTPRBP23467 AC096577.2-201ENST00000611455 153 ntBASIC4.17□□□□□ -1.74
PTPRBP23467 AL603750.1-201ENST00000624216 1717 ntBASIC4.17□□□□□ -1.74
PTPRBP23467 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.17□□□□□ -1.74
PTPRBP23467 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PTPRBP23467 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPRBP23467 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPRBP23467 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPRBP23467 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTPRBP23467 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPRBP23467 AL133243.3-201ENST00000617415 3004 ntBASIC4.17□□□□□ -1.74
PTPRBP23467 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTPRBP23467 AL136164.3-201ENST00000624429 3978 ntBASIC4.16□□□□□ -1.74
PTPRBP23467 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.16□□□□□ -1.74
PTPRBP23467 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.16□□□□□ -1.74
PTPRBP23467 MFSD13B-201ENST00000420133 1290 ntBASIC4.16□□□□□ -1.74
PTPRBP23467 RPS3AP12-201ENST00000443616 753 ntBASIC4.16□□□□□ -1.74
PTPRBP23467 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.16□□□□□ -1.74
PTPRBP23467 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.16□□□□□ -1.74
PTPRBP23467 snoU13.24-201ENST00000458998 104 ntBASIC4.16□□□□□ -1.74
PTPRBP23467 AC022336.1-201ENST00000475510 337 ntBASIC4.16□□□□□ -1.74
PTPRBP23467 KCTD9P2-201ENST00000512203 1013 ntBASIC4.16□□□□□ -1.74
PTPRBP23467 MIR4298-201ENST00000584380 73 ntBASIC4.16□□□□□ -1.74
PTPRBP23467 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.16□□□□□ -1.74
PTPRBP23467 AC015967.1-201ENST00000619893 476 ntBASIC4.16□□□□□ -1.74
PTPRBP23467 AP000648.2-201ENST00000624182 404 ntBASIC4.16□□□□□ -1.74
PTPRBP23467 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.16□□□□□ -1.74
PTPRBP23467 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PTPRBP23467 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
PTPRBP23467 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTPRBP23467 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTPRBP23467 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.16□□□□□ -1.74
PTPRBP23467 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
PTPRBP23467 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
PTPRBP23467 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms