Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTCAO00442 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTCAO00442 DDX6P1-205ENST00000441966 1436 ntBASIC4.78□□□□□ -1.64
RTCAO00442 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.78□□□□□ -1.64
RTCAO00442 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.78□□□□□ -1.64
RTCAO00442 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTCAO00442 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.78□□□□□ -1.64
RTCAO00442 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.78□□□□□ -1.64
RTCAO00442 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTCAO00442 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.78□□□□□ -1.64
RTCAO00442 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
RTCAO00442 PNPT1P2-201ENST00000456768 2050 ntBASIC4.77□□□□□ -1.65
RTCAO00442 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTCAO00442 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTCAO00442 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
RTCAO00442 AC109780.1-201ENST00000451768 1344 ntBASIC4.77□□□□□ -1.65
RTCAO00442 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTCAO00442 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTCAO00442 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RTCAO00442 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RTCAO00442 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RTCAO00442 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTCAO00442 METTL21EP-201ENST00000298105 713 ntBASIC4.77□□□□□ -1.65
RTCAO00442 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTCAO00442 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTCAO00442 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTCAO00442 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTCAO00442 MIR323B-201ENST00000385269 82 ntBASIC4.77□□□□□ -1.65
RTCAO00442 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RTCAO00442 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RTCAO00442 LRRC37BP1-201ENST00000398851 714 ntBASIC4.77□□□□□ -1.65
RTCAO00442 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.77□□□□□ -1.65
RTCAO00442 UBE2V1P15-201ENST00000407776 448 ntBASIC4.77□□□□□ -1.65
RTCAO00442 DPPA2P3-201ENST00000411853 655 ntBASIC4.77□□□□□ -1.65
RTCAO00442 DDX39BP1-205ENST00000422507 192 ntBASIC4.77□□□□□ -1.65
RTCAO00442 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.77□□□□□ -1.65
RTCAO00442 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.77□□□□□ -1.65
RTCAO00442 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.77□□□□□ -1.65
RTCAO00442 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.77□□□□□ -1.65
RTCAO00442 RPS29P9-201ENST00000440360 171 ntBASIC4.77□□□□□ -1.65
RTCAO00442 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.77□□□□□ -1.65
RTCAO00442 KNOP1P3-201ENST00000446933 426 ntBASIC4.77□□□□□ -1.65
RTCAO00442 AL354714.3-201ENST00000447284 493 ntBASIC4.77□□□□□ -1.65
RTCAO00442 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.77□□□□□ -1.65
RTCAO00442 RN7SL177P-201ENST00000476596 299 ntBASIC4.77□□□□□ -1.65
RTCAO00442 S100A11P1-201ENST00000477525 312 ntBASIC4.77□□□□□ -1.65
RTCAO00442 AC004815.1-201ENST00000484185 331 ntBASIC4.77□□□□□ -1.65
RTCAO00442 AC104687.1-201ENST00000485829 412 ntBASIC4.77□□□□□ -1.65
RTCAO00442 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.77□□□□□ -1.65
RTCAO00442 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.77□□□□□ -1.65
RTCAO00442 FTH1P24-201ENST00000503502 462 ntBASIC4.77□□□□□ -1.65
RTCAO00442 ENPP7P11-201ENST00000505915 627 ntBASIC4.77□□□□□ -1.65
RTCAO00442 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.77□□□□□ -1.65
RTCAO00442 AC004980.4-201ENST00000513375 203 ntBASIC4.77□□□□□ -1.65
RTCAO00442 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.77□□□□□ -1.65
RTCAO00442 RNA5SP497-201ENST00000516081 97 ntBASIC4.77□□□□□ -1.65
RTCAO00442 RNA5SP43-201ENST00000516559 110 ntBASIC4.77□□□□□ -1.65
RTCAO00442 SCARNA21.2-201ENST00000516600 166 ntBASIC4.77□□□□□ -1.65
RTCAO00442 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RTCAO00442 IGKV2-36-201ENST00000519999 223 ntBASIC4.77□□□□□ -1.65
RTCAO00442 IGLV2-28-201ENST00000520681 304 ntBASIC4.77□□□□□ -1.65
RTCAO00442 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.77□□□□□ -1.65
RTCAO00442 OR10G5P-201ENST00000532733 358 ntBASIC4.77□□□□□ -1.65
RTCAO00442 AL512310.9-201ENST00000553311 948 ntBASIC4.77□□□□□ -1.65
RTCAO00442 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.77□□□□□ -1.65
RTCAO00442 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.77□□□□□ -1.65
RTCAO00442 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.77□□□□□ -1.65
RTCAO00442 CBX3P2-202ENST00000583365 535 ntBASIC4.77□□□□□ -1.65
RTCAO00442 MIR4691-201ENST00000583764 85 ntBASIC4.77□□□□□ -1.65
RTCAO00442 AC011447.4-201ENST00000587562 111 ntBASIC4.77□□□□□ -1.65
RTCAO00442 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.77□□□□□ -1.65
RTCAO00442 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.77□□□□□ -1.65
RTCAO00442 AC005972.3-201ENST00000606304 481 ntBASIC4.77□□□□□ -1.65
RTCAO00442 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTCAO00442 AP000720.1-201ENST00000625091 483 ntBASIC4.77□□□□□ -1.65
RTCAO00442 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.77□□□□□ -1.65
RTCAO00442 AC100778.3-201ENST00000580060 1750 ntBASIC4.77□□□□□ -1.65
RTCAO00442 MFSD8-220ENST00000641243 1422 ntBASIC4.77□□□□□ -1.65
RTCAO00442 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTCAO00442 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.77□□□□□ -1.65
RTCAO00442 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
RTCAO00442 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.77□□□□□ -1.65
RTCAO00442 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RTCAO00442 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
RTCAO00442 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTCAO00442 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
RTCAO00442 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.77□□□□□ -1.65
RTCAO00442 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RTCAO00442 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.76□□□□□ -1.65
RTCAO00442 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RTCAO00442 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.76□□□□□ -1.65
RTCAO00442 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTCAO00442 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RTCAO00442 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTCAO00442 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.76□□□□□ -1.65
RTCAO00442 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.76□□□□□ -1.65
RTCAO00442 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
RTCAO00442 AL049737.1-201ENST00000413920 1403 ntBASIC4.76□□□□□ -1.65
RTCAO00442 GJA6P-201ENST00000415117 1042 ntBASIC4.76□□□□□ -1.65
RTCAO00442 LINC01881-201ENST00000416103 412 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms