Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 ZNF806-201ENST00000438300 1774 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 SNORA63-201ENST00000363450 132 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 Y_RNA.460-201ENST00000384255 102 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 MIR320C1-201ENST00000408566 88 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 RNA5SP118-201ENST00000410385 109 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 U3.43-201ENST00000410734 213 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AC017035.1-201ENST00000411999 1115 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 HMGA1P8-201ENST00000414130 321 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 MRPS21P5-201ENST00000417885 231 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 CYP4F30P-202ENST00000420048 405 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 GAPDHP57-201ENST00000424400 585 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AL035410.1-201ENST00000427409 427 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AC007677.1-201ENST00000445757 515 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AC092421.1-201ENST00000448148 418 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 RBMY2TP-201ENST00000451162 947 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 SNX18P26-201ENST00000458433 740 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 RN7SL145P-201ENST00000469955 296 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 HMGN1P10-201ENST00000474557 553 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 RN7SL182P-201ENST00000496499 300 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 IMPA1P1-201ENST00000510718 842 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 RNU6-1281P-201ENST00000516223 105 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 snoU109.5-201ENST00000516231 132 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 IGKV2-36-201ENST00000519999 223 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AF279873.1-201ENST00000523393 313 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AC005498.1-201ENST00000592125 465 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AL589765.5-201ENST00000596133 515 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AC122710.3-201ENST00000606566 541 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AC011816.2-201ENST00000607089 556 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AL136295.6-201ENST00000610486 658 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AC116165.3-201ENST00000614524 400 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AC008626.2-201ENST00000624425 248 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AC243725.1-201ENST00000637164 436 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 AC112487.2-201ENST00000637950 304 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.69□□□□□ -1.5
SHISA3A0PJX4 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.69□□□□□ -1.5
SHISA3A0PJX4 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms