Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 OR8A2P-201ENST00000528631 952 ntBASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 AC090424.1-201ENST00000535243 736 ntBASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 AP003115.1-201ENST00000569849 463 ntBASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 AC233280.2-201ENST00000603917 1070 ntBASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 AC013244.1-201ENST00000604279 193 ntBASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 AL139286.1-201ENST00000604465 483 ntBASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 AC097467.4-201ENST00000605504 141 ntBASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 OR52B5P-202ENST00000641118 1110 ntBASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 AC006511.3-201ENST00000624929 1783 ntBASIC8.27□□□□□ -1.08
PDZRN3Q9UPQ7 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AC011447.7-201ENST00000624228 1590 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AC105749.1-201ENST00000631338 2008 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 COX6B1P3-201ENST00000312310 260 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 RPL11P4-201ENST00000332269 436 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 RNU6-1331P-201ENST00000363658 106 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 RNU6-1062P-201ENST00000383908 107 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AL359092.1-201ENST00000417156 265 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 ZNF90P2-204ENST00000419323 1075 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AC083862.1-201ENST00000427378 1242 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AC244505.5-201ENST00000443639 207 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 COX4I1P2-201ENST00000447446 547 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 PNPLA4P1-201ENST00000458328 305 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 U8.20-201ENST00000459445 131 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AC090096.1-201ENST00000489168 390 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AC108078.1-201ENST00000508073 725 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 ZNF519P4-201ENST00000514008 125 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 Y_RNA.720-201ENST00000517166 92 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AL512360.1-201ENST00000555346 234 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AC016925.2-201ENST00000605108 242 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 SNORA74.4-201ENST00000607595 199 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 Z95327.3-201ENST00000610385 572 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AL355974.3-201ENST00000617383 467 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 U1.41-201ENST00000617626 165 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AL133370.2-201ENST00000619934 439 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 ZNF849P-201ENST00000594711 1566 ntBASIC8.27□□□□□ -1.09
PDZRN3Q9UPQ7 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 CREM-217ENST00000439705 2306 ntTSL 5 BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 AL353763.1-201ENST00000624467 1628 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 RIOK3P1-201ENST00000418778 1528 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 RNU6-252P-201ENST00000363232 107 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 TANK-203ENST00000402568 878 ntTSL 5 BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms