Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 USP9YP18-201ENST00000425912 695 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 HSPE1P16-201ENST00000426640 348 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AL354707.3-201ENST00000427308 331 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 GAPDHP34-201ENST00000432112 823 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 RPS25P9-201ENST00000435591 252 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 OR3D1P-201ENST00000438288 955 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 UBE2V1P3-201ENST00000439651 417 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 ARL5AP2-201ENST00000444698 533 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 USP9YP34-201ENST00000453983 808 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AL445687.2-201ENST00000458156 728 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 PSAT1P4-201ENST00000466500 526 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AC092989.1-201ENST00000481235 277 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AC122718.2-201ENST00000505325 591 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 OR7E99P-201ENST00000505750 922 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AC108120.2-201ENST00000512973 294 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 RN7SKP298-201ENST00000515950 94 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 RNU6-507P-201ENST00000516045 100 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 RN7SKP35-201ENST00000517210 151 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 TPM3P3-201ENST00000521343 354 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AC092709.1-201ENST00000521355 1045 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 MIR4528-201ENST00000577763 90 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 MIR4701-201ENST00000583094 63 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AC008555.7-201ENST00000605008 583 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AC141002.1-201ENST00000607025 279 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 MIR7109-201ENST00000613748 65 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 Y_RNA.804-201ENST00000615262 101 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AC006840.1-201ENST00000623069 542 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AC073592.6-201ENST00000624271 415 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 DDX18P6-201ENST00000450119 1997 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AC022164.1-201ENST00000568767 2673 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 TEX21P-201ENST00000447107 1476 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 MTND5P26-201ENST00000426018 1752 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 RNU6-374P-201ENST00000364146 108 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 Y_RNA.256-201ENST00000364594 104 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 RNU4-12P-201ENST00000365233 139 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AC007066.1-201ENST00000392902 381 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 RPL17P50-201ENST00000396131 546 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AL139805.1-201ENST00000407837 289 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 NPM1P4-201ENST00000414095 812 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AL590806.1-201ENST00000415818 853 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 MTATP6P27-201ENST00000416987 621 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 OR8F1P-201ENST00000425243 930 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 SEPT7P5-201ENST00000434048 306 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 B3GNT2P1-201ENST00000434960 952 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AL590399.4-201ENST00000436561 601 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 HMGB1P31-201ENST00000437242 427 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AC015983.1-201ENST00000441577 373 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AC004865.1-201ENST00000442276 1003 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms