Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
VSTM1Q6UX27 AP001284.1-201ENST00000528393 2118 ntBASIC5.41□□□□□ -1.54
VSTM1Q6UX27 CASC19-221ENST00000641309 1382 ntBASIC5.41□□□□□ -1.54
VSTM1Q6UX27 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 AL022311.1-201ENST00000623726 19416 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 MIR550A3-201ENST00000390735 95 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 AP002784.2-201ENST00000397300 549 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 MTCO2P31-201ENST00000402702 684 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 RPL5P19-201ENST00000404228 893 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 REREP1Y-201ENST00000422655 198 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 RPL7P34-201ENST00000433316 712 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 REREP2Y-201ENST00000439103 200 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 RPL6P5-201ENST00000445678 828 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 AL358794.1-201ENST00000445689 381 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 AC092155.2-201ENST00000454675 477 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 AC008280.2-201ENST00000455473 307 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 RN7SL443P-201ENST00000464331 290 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 RPS27AP16-201ENST00000492222 470 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 RFPL4AP3-201ENST00000515267 345 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 AC068993.1-201ENST00000546724 589 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 MRPS36P5-201ENST00000551909 298 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 NMNAT1P1-201ENST00000554095 876 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 MIR3936-201ENST00000584304 110 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 BNIP3P24-201ENST00000593398 557 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 MTCO2P22-201ENST00000603246 681 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 AC006363.1-201ENST00000603806 463 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 AL627230.1-201ENST00000613077 211 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 AL591926.8-201ENST00000616876 211 ntBASIC5.4□□□□□ -1.54
VSTM1Q6UX27 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VSTM1Q6UX27 AL450345.1-202ENST00000605741 3881 ntBASIC5.4□□□□□ -1.55
VSTM1Q6UX27 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VSTM1Q6UX27 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
VSTM1Q6UX27 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
VSTM1Q6UX27 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.39□□□□□ -1.55
VSTM1Q6UX27 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VSTM1Q6UX27 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VSTM1Q6UX27 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.39□□□□□ -1.55
VSTM1Q6UX27 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
VSTM1Q6UX27 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
VSTM1Q6UX27 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.39□□□□□ -1.55
VSTM1Q6UX27 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VSTM1Q6UX27 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
VSTM1Q6UX27 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VSTM1Q6UX27 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VSTM1Q6UX27 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VSTM1Q6UX27 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.39□□□□□ -1.55
VSTM1Q6UX27 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VSTM1Q6UX27 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VSTM1Q6UX27 SNORD56.4-201ENST00000363883 71 ntBASIC5.39□□□□□ -1.55
VSTM1Q6UX27 RNA5SP455-201ENST00000365190 119 ntBASIC5.39□□□□□ -1.55
VSTM1Q6UX27 RNY3P9-201ENST00000384727 106 ntBASIC5.39□□□□□ -1.55
VSTM1Q6UX27 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VSTM1Q6UX27 Z97832.1-201ENST00000402490 328 ntBASIC5.39□□□□□ -1.55
VSTM1Q6UX27 RNU2-17P-201ENST00000410290 190 ntBASIC5.39□□□□□ -1.55
VSTM1Q6UX27 RN7SKP97-201ENST00000410966 333 ntBASIC5.39□□□□□ -1.55
VSTM1Q6UX27 MTCYBP7-201ENST00000419540 1134 ntBASIC5.39□□□□□ -1.55
VSTM1Q6UX27 AC006065.1-201ENST00000422539 802 ntBASIC5.39□□□□□ -1.55
VSTM1Q6UX27 PNRC2P1-201ENST00000423940 420 ntBASIC5.39□□□□□ -1.55
VSTM1Q6UX27 USP9YP24-201ENST00000434374 697 ntBASIC5.39□□□□□ -1.55
VSTM1Q6UX27 SETP8-201ENST00000435341 628 ntBASIC5.39□□□□□ -1.55
VSTM1Q6UX27 RPL12P18-201ENST00000437175 325 ntBASIC5.39□□□□□ -1.55
VSTM1Q6UX27 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.39□□□□□ -1.55
VSTM1Q6UX27 AC000041.1-201ENST00000439655 175 ntBASIC5.39□□□□□ -1.55
VSTM1Q6UX27 USP9YP17-201ENST00000444617 696 ntBASIC5.39□□□□□ -1.55
VSTM1Q6UX27 AL354714.3-201ENST00000447284 493 ntBASIC5.39□□□□□ -1.55
VSTM1Q6UX27 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
VSTM1Q6UX27 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.39□□□□□ -1.55
VSTM1Q6UX27 AL122001.1-201ENST00000457027 370 ntBASIC5.39□□□□□ -1.55
VSTM1Q6UX27 AC108161.1-201ENST00000461060 402 ntBASIC5.39□□□□□ -1.55
VSTM1Q6UX27 RPL5P13-201ENST00000462840 709 ntBASIC5.39□□□□□ -1.55
VSTM1Q6UX27 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms