Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC2.84□□□□□ -1.95
VPS13DQ5THJ4 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VPS13DQ5THJ4 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC2.84□□□□□ -1.95
VPS13DQ5THJ4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC2.84□□□□□ -1.95
VPS13DQ5THJ4 RPS4XP4-201ENST00000443195 763 ntBASIC2.84□□□□□ -1.95
VPS13DQ5THJ4 RPS3AP12-201ENST00000443616 753 ntBASIC2.84□□□□□ -1.95
VPS13DQ5THJ4 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC2.84□□□□□ -1.95
VPS13DQ5THJ4 PLGLA-201ENST00000465668 449 ntBASIC2.84□□□□□ -1.95
VPS13DQ5THJ4 AC108145.1-201ENST00000503770 153 ntBASIC2.84□□□□□ -1.95
VPS13DQ5THJ4 NPM1P21-201ENST00000513394 762 ntBASIC2.84□□□□□ -1.95
VPS13DQ5THJ4 RN7SKP83-201ENST00000516512 178 ntBASIC2.84□□□□□ -1.95
VPS13DQ5THJ4 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC2.84□□□□□ -1.95
VPS13DQ5THJ4 USP9YP4-201ENST00000424401 1745 ntBASIC2.84□□□□□ -1.95
VPS13DQ5THJ4 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
VPS13DQ5THJ4 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
VPS13DQ5THJ4 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
VPS13DQ5THJ4 MIR7-3-201ENST00000384898 110 ntBASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 MIR34B-201ENST00000385076 84 ntBASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 RPL21P65-201ENST00000406094 466 ntBASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 HSPE1P12-201ENST00000412576 301 ntBASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 TPT1P2-201ENST00000413105 503 ntBASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 RPL21P91-201ENST00000429231 479 ntBASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 RPS20P21-201ENST00000466859 343 ntBASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 AC011471.1-201ENST00000585766 187 ntBASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 RPL23AP97-201ENST00000568955 471 ntBASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 AC090286.3-201ENST00000573133 187 ntBASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 AL160290.3-201ENST00000604869 165 ntBASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 AC016588.2-201ENST00000632484 3021 ntBASIC2.84□□□□□ -1.96
VPS13DQ5THJ4 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 RPS20P4-201ENST00000461659 355 ntBASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 DUX4L52-201ENST00000549363 777 ntBASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 MIR5685-201ENST00000579080 79 ntBASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 AL442067.2-201ENST00000614033 363 ntBASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 FP236240.3-201ENST00000623061 327 ntBASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 AC010608.2-201ENST00000624830 470 ntBASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 AC022417.1-201ENST00000624768 1303 ntBASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 RPL21P17-201ENST00000397467 475 ntBASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 CRYBB2P1-203ENST00000415709 538 ntBASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 AC016550.3-201ENST00000515706 767 ntBASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 AC092354.2-201ENST00000607786 514 ntBASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 NDUFB4P4-201ENST00000404822 243 ntBASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 AC244505.7-201ENST00000599675 272 ntBASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 AC130352.1-201ENST00000602979 661 ntBASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 AC012468.1-201ENST00000604888 430 ntBASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms