Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC006504.8-201ENST00000621046 635 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 AC116563.2-201ENST00000624751 535 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 UGT2B24P-201ENST00000514441 1597 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 AC022325.1-201ENST00000502748 2199 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 AC109315.1-201ENST00000584143 1347 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 METTL21EP-201ENST00000298105 713 ntBASIC7.94□□□□□ -1.14
RC3H1Q5TC82 RNA5SP88-201ENST00000365560 109 ntBASIC7.94□□□□□ -1.14
RC3H1Q5TC82 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 Y_RNA.459-201ENST00000384251 102 ntBASIC7.94□□□□□ -1.14
RC3H1Q5TC82 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 PCBP2P1-201ENST00000437262 977 ntBASIC7.94□□□□□ -1.14
RC3H1Q5TC82 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 FTLP8-201ENST00000446770 267 ntBASIC7.94□□□□□ -1.14
RC3H1Q5TC82 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 ATP5LP3-201ENST00000514223 304 ntBASIC7.94□□□□□ -1.14
RC3H1Q5TC82 snoU109.5-201ENST00000516231 132 ntBASIC7.94□□□□□ -1.14
RC3H1Q5TC82 Y_RNA.710-201ENST00000516975 110 ntBASIC7.94□□□□□ -1.14
RC3H1Q5TC82 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 AC105029.1-201ENST00000520250 669 ntBASIC7.94□□□□□ -1.14
RC3H1Q5TC82 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 ZNF322P1-201ENST00000568013 1209 ntBASIC7.94□□□□□ -1.14
RC3H1Q5TC82 COX6CP7-201ENST00000597056 208 ntBASIC7.94□□□□□ -1.14
RC3H1Q5TC82 AC007687.1-201ENST00000602704 304 ntBASIC7.94□□□□□ -1.14
RC3H1Q5TC82 AL355598.1-201ENST00000604169 202 ntBASIC7.94□□□□□ -1.14
RC3H1Q5TC82 AC010200.2-201ENST00000605098 235 ntBASIC7.94□□□□□ -1.14
RC3H1Q5TC82 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 AC005858.4-201ENST00000623191 700 ntBASIC7.94□□□□□ -1.14
RC3H1Q5TC82 AC068880.5-201ENST00000624331 290 ntBASIC7.94□□□□□ -1.14
RC3H1Q5TC82 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 AC011416.1-201ENST00000514947 1732 ntBASIC7.94□□□□□ -1.14
RC3H1Q5TC82 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 AC138915.3-201ENST00000562908 1389 ntBASIC7.94□□□□□ -1.14
RC3H1Q5TC82 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 AC123769.1-201ENST00000530992 3192 ntBASIC7.94□□□□□ -1.14
RC3H1Q5TC82 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
RC3H1Q5TC82 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 CUBNP3-201ENST00000457461 1784 ntBASIC7.93□□□□□ -1.14
RC3H1Q5TC82 RNU6-1085P-201ENST00000363576 107 ntBASIC7.93□□□□□ -1.14
RC3H1Q5TC82 RNU5E-5P-201ENST00000365379 116 ntBASIC7.93□□□□□ -1.14
RC3H1Q5TC82 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 Y_RNA.409-201ENST00000383990 98 ntBASIC7.93□□□□□ -1.14
RC3H1Q5TC82 RNU6-574P-201ENST00000384265 107 ntBASIC7.93□□□□□ -1.14
RC3H1Q5TC82 RPS3AP2-201ENST00000407190 754 ntBASIC7.93□□□□□ -1.14
RC3H1Q5TC82 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 PTP4A1P1-201ENST00000420539 515 ntBASIC7.93□□□□□ -1.14
RC3H1Q5TC82 OFD1P12Y-201ENST00000427963 1207 ntBASIC7.93□□□□□ -1.14
RC3H1Q5TC82 AC234064.1-201ENST00000436312 247 ntBASIC7.93□□□□□ -1.14
RC3H1Q5TC82 UBE2FP3-201ENST00000436366 524 ntBASIC7.93□□□□□ -1.14
RC3H1Q5TC82 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 RPL36AP39-201ENST00000445859 318 ntBASIC7.93□□□□□ -1.14
RC3H1Q5TC82 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 AC021074.2-201ENST00000468434 172 ntBASIC7.93□□□□□ -1.14
RC3H1Q5TC82 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 AC021146.2-201ENST00000504736 556 ntBASIC7.93□□□□□ -1.14
RC3H1Q5TC82 AC087808.1-201ENST00000520501 361 ntBASIC7.93□□□□□ -1.14
RC3H1Q5TC82 RGS4-207ENST00000527809 817 ntTSL 4 BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms