Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC6.18□□□□□ -1.42
PTCH1Q13635 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.18□□□□□ -1.42
PTCH1Q13635 AC017100.2-201ENST00000584628 355 ntBASIC6.18□□□□□ -1.42
PTCH1Q13635 AC002069.2-201ENST00000603580 883 ntBASIC6.18□□□□□ -1.42
PTCH1Q13635 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.18□□□□□ -1.42
PTCH1Q13635 AC120036.2-201ENST00000509729 1474 ntBASIC6.18□□□□□ -1.42
PTCH1Q13635 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.18□□□□□ -1.42
PTCH1Q13635 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCH1Q13635 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PTCH1Q13635 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PTCH1Q13635 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PTCH1Q13635 TET1P1-201ENST00000426627 2301 ntBASIC6.18□□□□□ -1.42
PTCH1Q13635 AC003985.2-201ENST00000562268 1669 ntBASIC6.18□□□□□ -1.42
PTCH1Q13635 AL731532.2-201ENST00000623542 1953 ntBASIC6.17□□□□□ -1.42
PTCH1Q13635 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PTCH1Q13635 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTCH1Q13635 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.17□□□□□ -1.42
PTCH1Q13635 MIR449B-201ENST00000384995 97 ntBASIC6.17□□□□□ -1.42
PTCH1Q13635 AL607077.1-201ENST00000401718 499 ntBASIC6.17□□□□□ -1.42
PTCH1Q13635 NPM1P38-201ENST00000403835 865 ntBASIC6.17□□□□□ -1.42
PTCH1Q13635 AL139039.2-201ENST00000407436 479 ntBASIC6.17□□□□□ -1.42
PTCH1Q13635 AL035696.2-201ENST00000407941 709 ntBASIC6.17□□□□□ -1.42
PTCH1Q13635 RNU6ATAC-201ENST00000408749 126 ntBASIC6.17□□□□□ -1.42
PTCH1Q13635 RNU6-233P-201ENST00000410845 141 ntBASIC6.17□□□□□ -1.42
PTCH1Q13635 CTSL3P-202ENST00000412179 788 ntBASIC6.17□□□□□ -1.42
PTCH1Q13635 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.17□□□□□ -1.42
PTCH1Q13635 GCA-203ENST00000429691 824 ntTSL 3 BASIC6.17□□□□□ -1.42
PTCH1Q13635 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.17□□□□□ -1.42
PTCH1Q13635 KATNBL1P2-201ENST00000433311 835 ntBASIC6.17□□□□□ -1.42
PTCH1Q13635 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTCH1Q13635 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.17□□□□□ -1.42
PTCH1Q13635 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.17□□□□□ -1.42
PTCH1Q13635 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC6.17□□□□□ -1.42
PTCH1Q13635 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC6.17□□□□□ -1.42
PTCH1Q13635 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.17□□□□□ -1.42
PTCH1Q13635 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTCH1Q13635 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
PTCH1Q13635 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.17□□□□□ -1.42
PTCH1Q13635 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTCH1Q13635 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PTCH1Q13635 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTCH1Q13635 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
PTCH1Q13635 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
PTCH1Q13635 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.17□□□□□ -1.42
PTCH1Q13635 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTCH1Q13635 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTCH1Q13635 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTCH1Q13635 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
PTCH1Q13635 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTCH1Q13635 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PTCH1Q13635 SNORA9-201ENST00000384215 133 ntBASIC6.16□□□□□ -1.42
PTCH1Q13635 RPL21P65-201ENST00000406094 466 ntBASIC6.16□□□□□ -1.42
PTCH1Q13635 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCH1Q13635 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.16□□□□□ -1.42
PTCH1Q13635 AL590806.1-201ENST00000415818 853 ntBASIC6.16□□□□□ -1.42
PTCH1Q13635 MFSD13B-201ENST00000420133 1290 ntBASIC6.16□□□□□ -1.42
PTCH1Q13635 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC6.16□□□□□ -1.42
PTCH1Q13635 HMGB3P5-201ENST00000428894 612 ntBASIC6.16□□□□□ -1.42
PTCH1Q13635 MRPL50P1-201ENST00000431951 384 ntBASIC6.16□□□□□ -1.42
PTCH1Q13635 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
PTCH1Q13635 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.16□□□□□ -1.42
PTCH1Q13635 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCH1Q13635 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCH1Q13635 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC6.16□□□□□ -1.42
PTCH1Q13635 AC007546.1-201ENST00000619452 559 ntBASIC6.16□□□□□ -1.42
PTCH1Q13635 AC015804.1-201ENST00000622935 435 ntBASIC6.16□□□□□ -1.42
PTCH1Q13635 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.16□□□□□ -1.42
PTCH1Q13635 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.16□□□□□ -1.42
PTCH1Q13635 AC139769.1-204ENST00000472297 1931 ntBASIC6.16□□□□□ -1.42
PTCH1Q13635 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTCH1Q13635 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC6.16□□□□□ -1.42
PTCH1Q13635 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.16□□□□□ -1.42
PTCH1Q13635 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
PTCH1Q13635 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTCH1Q13635 Z74021.1-201ENST00000423610 407 ntBASIC6.16□□□□□ -1.42
PTCH1Q13635 MTCO1P54-201ENST00000430139 712 ntBASIC6.16□□□□□ -1.42
PTCH1Q13635 ARAFP2-201ENST00000440565 559 ntBASIC6.16□□□□□ -1.42
PTCH1Q13635 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCH1Q13635 RNA5SP49-201ENST00000516450 115 ntBASIC6.16□□□□□ -1.42
PTCH1Q13635 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCH1Q13635 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTCH1Q13635 HNRNPCP4-201ENST00000571636 900 ntBASIC6.16□□□□□ -1.42
PTCH1Q13635 AL451086.1-201ENST00000605596 223 ntBASIC6.16□□□□□ -1.42
PTCH1Q13635 AC132825.8-201ENST00000640783 297 ntBASIC6.16□□□□□ -1.42
PTCH1Q13635 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
PTCH1Q13635 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTCH1Q13635 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC6.15□□□□□ -1.42
PTCH1Q13635 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
PTCH1Q13635 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
PTCH1Q13635 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PTCH1Q13635 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PTCH1Q13635 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
PTCH1Q13635 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.15□□□□□ -1.42
PTCH1Q13635 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
PTCH1Q13635 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
PTCH1Q13635 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
PTCH1Q13635 CASC19-206ENST00000641028 1430 ntBASIC6.15□□□□□ -1.43
PTCH1Q13635 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
PTCH1Q13635 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PTCH1Q13635 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms