Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MIR7155-201ENST00000615925 56 ntBASIC5.16□□□□□ -1.58
HADHAP40939 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.16□□□□□ -1.58
HADHAP40939 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.16□□□□□ -1.58
HADHAP40939 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.16□□□□□ -1.58
HADHAP40939 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.16□□□□□ -1.58
HADHAP40939 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HADHAP40939 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HADHAP40939 PANDAR-201ENST00000629595 1506 ntBASIC5.16□□□□□ -1.58
HADHAP40939 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HADHAP40939 MFSD8-213ENST00000641134 1327 ntBASIC5.16□□□□□ -1.58
HADHAP40939 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
HADHAP40939 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.16□□□□□ -1.58
HADHAP40939 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HADHAP40939 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HADHAP40939 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
HADHAP40939 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
HADHAP40939 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HADHAP40939 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HADHAP40939 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
HADHAP40939 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
HADHAP40939 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
HADHAP40939 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HADHAP40939 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
HADHAP40939 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HADHAP40939 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.15□□□□□ -1.58
HADHAP40939 IGKV7-3-201ENST00000357453 298 ntBASIC5.15□□□□□ -1.59
HADHAP40939 AL590290.1-201ENST00000405336 380 ntBASIC5.15□□□□□ -1.59
HADHAP40939 DUTP5-201ENST00000406790 469 ntBASIC5.15□□□□□ -1.59
HADHAP40939 GSTM3P2-201ENST00000412746 530 ntBASIC5.15□□□□□ -1.59
HADHAP40939 AC013404.1-201ENST00000413068 249 ntBASIC5.15□□□□□ -1.59
HADHAP40939 VTA1P1-201ENST00000414044 866 ntBASIC5.15□□□□□ -1.59
HADHAP40939 AC013429.2-201ENST00000418798 781 ntBASIC5.15□□□□□ -1.59
HADHAP40939 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.15□□□□□ -1.59
HADHAP40939 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.15□□□□□ -1.59
HADHAP40939 EEF1B2P5-201ENST00000444820 548 ntBASIC5.15□□□□□ -1.59
HADHAP40939 RPL31P44-201ENST00000447680 377 ntBASIC5.15□□□□□ -1.59
HADHAP40939 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.15□□□□□ -1.59
HADHAP40939 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.15□□□□□ -1.59
HADHAP40939 AC005229.2-201ENST00000456995 399 ntBASIC5.15□□□□□ -1.59
HADHAP40939 AC091180.1-201ENST00000462104 372 ntBASIC5.15□□□□□ -1.59
HADHAP40939 CCDC75P1-201ENST00000469247 791 ntBASIC5.15□□□□□ -1.59
HADHAP40939 CYCSP20-201ENST00000473154 315 ntBASIC5.15□□□□□ -1.59
HADHAP40939 UBA52P3-201ENST00000491303 382 ntBASIC5.15□□□□□ -1.59
HADHAP40939 AC005912.1-201ENST00000495392 255 ntBASIC5.15□□□□□ -1.59
HADHAP40939 AC072052.1-201ENST00000496556 306 ntBASIC5.15□□□□□ -1.59
HADHAP40939 RNU6-334P-201ENST00000517072 102 ntBASIC5.15□□□□□ -1.59
HADHAP40939 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.15□□□□□ -1.59
HADHAP40939 POLR2KP1-201ENST00000553226 168 ntBASIC5.15□□□□□ -1.59
HADHAP40939 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.15□□□□□ -1.59
HADHAP40939 NDUFB4P11-201ENST00000560510 395 ntBASIC5.15□□□□□ -1.59
HADHAP40939 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.15□□□□□ -1.59
HADHAP40939 EIF1P5-201ENST00000585002 234 ntBASIC5.15□□□□□ -1.59
HADHAP40939 ZNF92P3-201ENST00000596594 954 ntBASIC5.15□□□□□ -1.59
HADHAP40939 AC119501.1-201ENST00000603646 475 ntBASIC5.15□□□□□ -1.59
HADHAP40939 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.15□□□□□ -1.59
HADHAP40939 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.15□□□□□ -1.59
HADHAP40939 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.15□□□□□ -1.59
HADHAP40939 AC068880.4-201ENST00000623082 495 ntBASIC5.15□□□□□ -1.59
HADHAP40939 AP002505.2-201ENST00000623585 696 ntBASIC5.15□□□□□ -1.59
HADHAP40939 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.15□□□□□ -1.59
HADHAP40939 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.15□□□□□ -1.59
HADHAP40939 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HADHAP40939 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HADHAP40939 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
HADHAP40939 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HADHAP40939 AC109780.1-201ENST00000451768 1344 ntBASIC5.15□□□□□ -1.59
HADHAP40939 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.15□□□□□ -1.59
HADHAP40939 MAPK10-304ENST00000641341 3984 ntBASIC5.15□□□□□ -1.59
HADHAP40939 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.15□□□□□ -1.59
HADHAP40939 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HADHAP40939 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HADHAP40939 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.14□□□□□ -1.59
HADHAP40939 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HADHAP40939 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HADHAP40939 AL118496.1-201ENST00000440201 1812 ntBASIC5.14□□□□□ -1.59
HADHAP40939 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HADHAP40939 SNORD56.4-201ENST00000363883 71 ntBASIC5.14□□□□□ -1.59
HADHAP40939 SNORA58B-201ENST00000364259 136 ntBASIC5.14□□□□□ -1.59
HADHAP40939 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HADHAP40939 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
HADHAP40939 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HADHAP40939 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.14□□□□□ -1.59
HADHAP40939 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HADHAP40939 RN7SKP126-201ENST00000411143 300 ntBASIC5.14□□□□□ -1.59
HADHAP40939 DPPA2P3-201ENST00000411853 655 ntBASIC5.14□□□□□ -1.59
HADHAP40939 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.14□□□□□ -1.59
HADHAP40939 RPL23AP27-201ENST00000415161 451 ntBASIC5.14□□□□□ -1.59
HADHAP40939 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.14□□□□□ -1.59
HADHAP40939 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.14□□□□□ -1.59
HADHAP40939 RPS27P18-201ENST00000431701 247 ntBASIC5.14□□□□□ -1.59
HADHAP40939 FTH1P16-201ENST00000435241 552 ntBASIC5.14□□□□□ -1.59
HADHAP40939 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.14□□□□□ -1.59
HADHAP40939 RPL12P46-201ENST00000436610 195 ntBASIC5.14□□□□□ -1.59
HADHAP40939 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.14□□□□□ -1.59
HADHAP40939 AC245047.2-201ENST00000441060 530 ntBASIC5.14□□□□□ -1.59
HADHAP40939 BTF3P6-201ENST00000448054 499 ntBASIC5.14□□□□□ -1.59
HADHAP40939 AL389915.2-201ENST00000454576 441 ntBASIC5.14□□□□□ -1.59
HADHAP40939 AC009127.1-201ENST00000467090 155 ntBASIC5.14□□□□□ -1.59
HADHAP40939 AC005532.2-201ENST00000467154 373 ntBASIC5.14□□□□□ -1.59
HADHAP40939 AC092902.1-201ENST00000486999 259 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 196 ms