Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SHC1P29353 AC000123.3-201ENST00000624029 4975 ntBASIC4.36□□□□□ -1.71
SHC1P29353 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHC1P29353 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SHC1P29353 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SHC1P29353 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.36□□□□□ -1.71
SHC1P29353 AL034370.1-201ENST00000397254 1590 ntBASIC4.36□□□□□ -1.71
SHC1P29353 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.35□□□□□ -1.71
SHC1P29353 AC005332.5-201ENST00000591222 2919 ntBASIC4.35□□□□□ -1.71
SHC1P29353 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHC1P29353 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHC1P29353 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHC1P29353 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHC1P29353 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SHC1P29353 RNU6-618P-201ENST00000363518 112 ntBASIC4.35□□□□□ -1.71
SHC1P29353 SNORD96B-201ENST00000386148 79 ntBASIC4.35□□□□□ -1.71
SHC1P29353 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SHC1P29353 RNU6-1320P-201ENST00000390838 107 ntBASIC4.35□□□□□ -1.71
SHC1P29353 RNU6-1269P-201ENST00000391139 107 ntBASIC4.35□□□□□ -1.71
SHC1P29353 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SHC1P29353 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.35□□□□□ -1.71
SHC1P29353 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.35□□□□□ -1.71
SHC1P29353 AL360081.1-201ENST00000428299 555 ntBASIC4.35□□□□□ -1.71
SHC1P29353 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.35□□□□□ -1.71
SHC1P29353 MTND4LP14-201ENST00000429447 288 ntBASIC4.35□□□□□ -1.71
SHC1P29353 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.35□□□□□ -1.71
SHC1P29353 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.35□□□□□ -1.71
SHC1P29353 AL645638.1-201ENST00000440519 361 ntBASIC4.35□□□□□ -1.71
SHC1P29353 MRPL48P1-201ENST00000445390 636 ntBASIC4.35□□□□□ -1.71
SHC1P29353 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
SHC1P29353 TVP23BP2-201ENST00000455082 615 ntBASIC4.35□□□□□ -1.71
SHC1P29353 RNU6-599P-201ENST00000459383 107 ntBASIC4.35□□□□□ -1.71
SHC1P29353 RNU6-1193P-201ENST00000459461 107 ntBASIC4.35□□□□□ -1.71
SHC1P29353 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.35□□□□□ -1.71
SHC1P29353 RN7SL558P-201ENST00000497468 299 ntBASIC4.35□□□□□ -1.71
SHC1P29353 AC016550.1-201ENST00000505348 785 ntBASIC4.35□□□□□ -1.71
SHC1P29353 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.35□□□□□ -1.71
SHC1P29353 AC010460.2-201ENST00000509054 677 ntBASIC4.35□□□□□ -1.71
SHC1P29353 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.35□□□□□ -1.71
SHC1P29353 RFPL4AP5-201ENST00000514977 504 ntBASIC4.35□□□□□ -1.71
SHC1P29353 RNU6-709P-201ENST00000517257 104 ntBASIC4.35□□□□□ -1.71
SHC1P29353 HMGB1P19-201ENST00000517578 577 ntBASIC4.35□□□□□ -1.71
SHC1P29353 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.35□□□□□ -1.71
SHC1P29353 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHC1P29353 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.35□□□□□ -1.71
SHC1P29353 AP001880.2-201ENST00000538233 448 ntBASIC4.35□□□□□ -1.71
SHC1P29353 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.35□□□□□ -1.71
SHC1P29353 BGLT3-201ENST00000564523 994 ntBASIC4.35□□□□□ -1.71
SHC1P29353 SNORA74C-1-201ENST00000580726 201 ntBASIC4.35□□□□□ -1.71
SHC1P29353 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SHC1P29353 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.35□□□□□ -1.71
SHC1P29353 AL355802.4-201ENST00000607635 548 ntBASIC4.35□□□□□ -1.71
SHC1P29353 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.35□□□□□ -1.71
SHC1P29353 RNU6-368P-201ENST00000620928 107 ntBASIC4.35□□□□□ -1.71
SHC1P29353 RNU6-538P-201ENST00000622329 107 ntBASIC4.35□□□□□ -1.71
SHC1P29353 TMEM30CP-203ENST00000637814 1035 ntBASIC4.35□□□□□ -1.71
SHC1P29353 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.35□□□□□ -1.71
SHC1P29353 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SHC1P29353 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHC1P29353 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.35□□□□□ -1.71
SHC1P29353 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
SHC1P29353 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHC1P29353 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHC1P29353 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHC1P29353 DHX9P1-201ENST00000436565 3076 ntBASIC4.35□□□□□ -1.71
SHC1P29353 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHC1P29353 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHC1P29353 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHC1P29353 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHC1P29353 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SHC1P29353 RNU4-39P-201ENST00000362455 127 ntBASIC4.34□□□□□ -1.71
SHC1P29353 SNORA27.3-201ENST00000364937 134 ntBASIC4.34□□□□□ -1.71
SHC1P29353 SNORA72.3-201ENST00000365074 132 ntBASIC4.34□□□□□ -1.71
SHC1P29353 OR13C3-201ENST00000374781 1108 ntBASIC4.34□□□□□ -1.71
SHC1P29353 GCNT6-201ENST00000379591 934 ntBASIC4.34□□□□□ -1.71
SHC1P29353 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SHC1P29353 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SHC1P29353 CCNB2P1-201ENST00000399411 1150 ntBASIC4.34□□□□□ -1.71
SHC1P29353 RNA5SP113-201ENST00000410486 84 ntBASIC4.34□□□□□ -1.71
SHC1P29353 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SHC1P29353 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.34□□□□□ -1.71
SHC1P29353 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.34□□□□□ -1.71
SHC1P29353 AC007559.1-201ENST00000428736 355 ntBASIC4.34□□□□□ -1.71
SHC1P29353 AC073508.1-201ENST00000428866 656 ntBASIC4.34□□□□□ -1.71
SHC1P29353 RPS27P18-201ENST00000431701 247 ntBASIC4.34□□□□□ -1.71
SHC1P29353 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.34□□□□□ -1.71
SHC1P29353 TDGF1P1-201ENST00000445734 527 ntBASIC4.34□□□□□ -1.71
SHC1P29353 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.34□□□□□ -1.71
SHC1P29353 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.34□□□□□ -1.71
SHC1P29353 AC091685.2-201ENST00000454924 864 ntBASIC4.34□□□□□ -1.71
SHC1P29353 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.34□□□□□ -1.71
SHC1P29353 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.34□□□□□ -1.71
SHC1P29353 ARL4AP1-201ENST00000503220 705 ntBASIC4.34□□□□□ -1.71
SHC1P29353 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.34□□□□□ -1.71
SHC1P29353 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.34□□□□□ -1.71
SHC1P29353 TPT1P8-201ENST00000510120 555 ntBASIC4.34□□□□□ -1.71
SHC1P29353 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
SHC1P29353 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
SHC1P29353 OR5D15P-201ENST00000531671 942 ntBASIC4.34□□□□□ -1.71
SHC1P29353 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms