Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AL122125.1-201ENST00000616999 600 ntBASIC4.06□□□□□ -1.76
HLA-DPB1P04440 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.06□□□□□ -1.76
HLA-DPB1P04440 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DPB1P04440 AL442639.1-201ENST00000625030 1899 ntBASIC4.06□□□□□ -1.76
HLA-DPB1P04440 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DPB1P04440 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DPB1P04440 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DPB1P04440 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DPB1P04440 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DPB1P04440 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DPB1P04440 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DPB1P04440 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DPB1P04440 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DPB1P04440 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DPB1P04440 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 AC135352.1-201ENST00000506173 1418 ntBASIC4.05□□□□□ -1.76
HLA-DPB1P04440 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 RNU6-249P-201ENST00000363016 102 ntBASIC4.05□□□□□ -1.76
HLA-DPB1P04440 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 RNA5SP113-201ENST00000410486 84 ntBASIC4.05□□□□□ -1.76
HLA-DPB1P04440 RSU1P3-201ENST00000412878 835 ntBASIC4.05□□□□□ -1.76
HLA-DPB1P04440 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 PTP4A1P1-201ENST00000420539 515 ntBASIC4.05□□□□□ -1.76
HLA-DPB1P04440 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 NRBF2P3-201ENST00000432731 865 ntBASIC4.05□□□□□ -1.76
HLA-DPB1P04440 HLA-N-201ENST00000437516 135 ntBASIC4.05□□□□□ -1.76
HLA-DPB1P04440 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 AC079168.2-201ENST00000453977 416 ntBASIC4.05□□□□□ -1.76
HLA-DPB1P04440 RPS5P7-201ENST00000456664 608 ntBASIC4.05□□□□□ -1.76
HLA-DPB1P04440 AC113430.1-201ENST00000506872 718 ntBASIC4.05□□□□□ -1.76
HLA-DPB1P04440 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 PARP4P3-201ENST00000510265 317 ntBASIC4.05□□□□□ -1.76
HLA-DPB1P04440 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 AP000859.1-201ENST00000525536 307 ntBASIC4.05□□□□□ -1.76
HLA-DPB1P04440 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 ADAD1P2-201ENST00000588476 646 ntBASIC4.05□□□□□ -1.76
HLA-DPB1P04440 AC010201.1-201ENST00000605051 540 ntBASIC4.05□□□□□ -1.76
HLA-DPB1P04440 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 A2MP1-204ENST00000566278 4130 ntBASIC4.05□□□□□ -1.76
HLA-DPB1P04440 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 MAPK10-304ENST00000641341 3984 ntBASIC4.05□□□□□ -1.76
HLA-DPB1P04440 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPB1P04440 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 MAPK10-263ENST00000641052 4307 ntBASIC4.04□□□□□ -1.76
HLA-DPB1P04440 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 RN7SKP103-201ENST00000363848 320 ntBASIC4.04□□□□□ -1.76
HLA-DPB1P04440 SNORD74.4-201ENST00000364129 80 ntBASIC4.04□□□□□ -1.76
HLA-DPB1P04440 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 RNU1-63P-201ENST00000383902 164 ntBASIC4.04□□□□□ -1.76
HLA-DPB1P04440 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 AL591848.1-201ENST00000413092 322 ntBASIC4.04□□□□□ -1.76
HLA-DPB1P04440 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 AC073648.4-201ENST00000442655 781 ntBASIC4.04□□□□□ -1.76
HLA-DPB1P04440 H2AFZP5-201ENST00000446960 382 ntBASIC4.04□□□□□ -1.76
HLA-DPB1P04440 AL935212.3-201ENST00000450729 284 ntBASIC4.04□□□□□ -1.76
HLA-DPB1P04440 VN1R32P-201ENST00000452234 905 ntBASIC4.04□□□□□ -1.76
HLA-DPB1P04440 RPS6P2-201ENST00000454208 705 ntBASIC4.04□□□□□ -1.76
HLA-DPB1P04440 ISCUP1-201ENST00000454451 448 ntBASIC4.04□□□□□ -1.76
HLA-DPB1P04440 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 AC093890.1-201ENST00000502554 540 ntBASIC4.04□□□□□ -1.76
HLA-DPB1P04440 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 RN7SKP34-201ENST00000516142 244 ntBASIC4.04□□□□□ -1.76
HLA-DPB1P04440 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 NPM1P52-201ENST00000518264 846 ntBASIC4.04□□□□□ -1.76
HLA-DPB1P04440 IGHV3-63-201ENST00000518422 341 ntBASIC4.04□□□□□ -1.76
HLA-DPB1P04440 SOX5P1-201ENST00000524155 1127 ntBASIC4.04□□□□□ -1.76
HLA-DPB1P04440 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 AL512782.1-201ENST00000603093 364 ntBASIC4.04□□□□□ -1.76
HLA-DPB1P04440 AC103792.1-201ENST00000603591 919 ntBASIC4.04□□□□□ -1.76
HLA-DPB1P04440 AC117490.2-201ENST00000610042 594 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms