Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC188H7C350 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC188H7C350 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC188H7C350 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC188H7C350 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC188H7C350 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC188H7C350 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC188H7C350 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC188H7C350 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC188H7C350 AC009313.2-201ENST00000417893 1941 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CCDC188H7C350 SNURFL-201ENST00000309296 343 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 MIR323A-201ENST00000362199 86 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 SNORA51.1-201ENST00000363243 140 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC188H7C350 SNORA70-201ENST00000384436 135 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 MIR142-201ENST00000384835 87 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 HMGB1P10-201ENST00000395823 563 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC188H7C350 RNA5SP178-201ENST00000410380 128 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 USP9YP19-201ENST00000412165 485 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC188H7C350 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 FO393419.3-201ENST00000428741 282 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 AC005033.1-201ENST00000428904 813 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 RPL17P35-201ENST00000432217 549 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC188H7C350 AC092447.2-201ENST00000435487 669 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 AL590762.3-201ENST00000436372 640 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 AC099063.2-201ENST00000446360 662 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 CLIC4P1-201ENST00000453177 535 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 AL389915.2-201ENST00000454576 441 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 RPL7P48-201ENST00000461513 746 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 METTL15P1-201ENST00000481421 1045 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC188H7C350 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC188H7C350 AL671862.1-201ENST00000515851 349 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 RNU6-1004P-201ENST00000516584 111 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 AC134698.5-201ENST00000519444 336 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC188H7C350 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC188H7C350 AC079148.1-201ENST00000565944 819 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC188H7C350 FKBP1AP1-201ENST00000594588 318 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CCDC188H7C350 AC079395.2-201ENST00000610982 737 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CCDC188H7C350 AC024341.1-201ENST00000526444 1552 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 AC017104.4-201ENST00000636283 1592 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC188H7C350 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
CCDC188H7C350 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC188H7C350 AL136164.3-201ENST00000624429 3978 ntBASIC4.94□□□□□ -1.62
CCDC188H7C350 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CCDC188H7C350 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC188H7C350 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC188H7C350 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC188H7C350 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC188H7C350 MTCO1P11-201ENST00000429111 1528 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.93□□□□□ -1.62
CCDC188H7C350 ZNF90P1-201ENST00000480493 1951 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.93□□□□□ -1.62
CCDC188H7C350 RNU6-304P-201ENST00000364855 107 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 RNA5SP428-201ENST00000365129 132 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC188H7C350 MIR143-201ENST00000385300 106 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC188H7C350 AL590762.2-201ENST00000395798 571 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CCDC188H7C350 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
CCDC188H7C350 AL031119.1-201ENST00000404707 1879 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 RN7SKP59-201ENST00000410520 314 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.93□□□□□ -1.62
CCDC188H7C350 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC188H7C350 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC188H7C350 GTF2IP5-201ENST00000414608 731 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC188H7C350 AC009302.1-201ENST00000417147 390 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 AL590609.2-201ENST00000421430 368 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 NPM1P22-201ENST00000427761 952 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC188H7C350 AC093414.1-201ENST00000434712 514 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC188H7C350 RPL34P26-201ENST00000445636 354 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC188H7C350 RN7SL319P-201ENST00000480656 221 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC188H7C350 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.93□□□□□ -1.62
CCDC188H7C350 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC188H7C350 RNA5SP446-201ENST00000515955 82 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC188H7C350 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC188H7C350 MIR548Y-201ENST00000582739 110 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 AC126915.2-201ENST00000610957 190 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC188H7C350 AP002505.2-201ENST00000623585 696 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC188H7C350 AC055839.1-201ENST00000634467 498 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms