Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 RPS27AP17-201ENST00000463344 455 ntBASIC5.57□□□□□ -1.52
RGPD3A6NKT7 NPM1P21-201ENST00000513394 762 ntBASIC5.57□□□□□ -1.52
RGPD3A6NKT7 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.57□□□□□ -1.52
RGPD3A6NKT7 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
RGPD3A6NKT7 MIR6500-201ENST00000622700 86 ntBASIC5.57□□□□□ -1.52
RGPD3A6NKT7 AC010608.2-201ENST00000624830 470 ntBASIC5.57□□□□□ -1.52
RGPD3A6NKT7 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.57□□□□□ -1.52
RGPD3A6NKT7 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RGPD3A6NKT7 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RGPD3A6NKT7 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RGPD3A6NKT7 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RGPD3A6NKT7 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.56□□□□□ -1.52
RGPD3A6NKT7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
RGPD3A6NKT7 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
RGPD3A6NKT7 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RGPD3A6NKT7 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.56□□□□□ -1.52
RGPD3A6NKT7 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
RGPD3A6NKT7 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RGPD3A6NKT7 MIR200C-201ENST00000384980 68 ntBASIC5.56□□□□□ -1.52
RGPD3A6NKT7 RNA5SP36-201ENST00000410197 133 ntBASIC5.56□□□□□ -1.52
RGPD3A6NKT7 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.56□□□□□ -1.52
RGPD3A6NKT7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.56□□□□□ -1.52
RGPD3A6NKT7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.56□□□□□ -1.52
RGPD3A6NKT7 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.56□□□□□ -1.52
RGPD3A6NKT7 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RGPD3A6NKT7 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RGPD3A6NKT7 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RGPD3A6NKT7 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RGPD3A6NKT7 AL360270.2-201ENST00000562952 5985 ntBASIC5.56□□□□□ -1.52
RGPD3A6NKT7 AC004817.4-201ENST00000602396 3625 ntBASIC5.56□□□□□ -1.52
RGPD3A6NKT7 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RGPD3A6NKT7 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 Z74021.1-201ENST00000423610 407 ntBASIC5.55□□□□□ -1.52
RGPD3A6NKT7 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 NANOGP10-201ENST00000453325 895 ntBASIC5.55□□□□□ -1.52
RGPD3A6NKT7 ATP5G1P3-201ENST00000463301 410 ntBASIC5.55□□□□□ -1.52
RGPD3A6NKT7 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 AC006349.1-201ENST00000555526 235 ntBASIC5.55□□□□□ -1.52
RGPD3A6NKT7 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 AL391261.4-201ENST00000616012 481 ntBASIC5.55□□□□□ -1.52
RGPD3A6NKT7 AC073346.2-201ENST00000624724 2058 ntBASIC5.55□□□□□ -1.52
RGPD3A6NKT7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 AP001157.1-201ENST00000550837 2339 ntBASIC5.55□□□□□ -1.52
RGPD3A6NKT7 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 AC096664.2-201ENST00000411843 406 ntBASIC5.55□□□□□ -1.52
RGPD3A6NKT7 TCEA1P4-201ENST00000415066 844 ntBASIC5.55□□□□□ -1.52
RGPD3A6NKT7 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 KCTD9P2-201ENST00000512203 1013 ntBASIC5.55□□□□□ -1.52
RGPD3A6NKT7 AC005868.1-201ENST00000536421 331 ntBASIC5.55□□□□□ -1.52
RGPD3A6NKT7 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 CYCSP40-201ENST00000575927 294 ntBASIC5.55□□□□□ -1.52
RGPD3A6NKT7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.55□□□□□ -1.52
RGPD3A6NKT7 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RGPD3A6NKT7 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.54□□□□□ -1.52
RGPD3A6NKT7 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RGPD3A6NKT7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RGPD3A6NKT7 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RGPD3A6NKT7 AC018628.1-201ENST00000624147 3819 ntBASIC5.54□□□□□ -1.52
RGPD3A6NKT7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
RGPD3A6NKT7 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RGPD3A6NKT7 LINC00561-201ENST00000565815 2738 ntBASIC5.54□□□□□ -1.52
RGPD3A6NKT7 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RGPD3A6NKT7 OR4A15-201ENST00000314706 1035 ntBASIC5.54□□□□□ -1.52
RGPD3A6NKT7 OR11H4-201ENST00000315409 1082 ntBASIC5.54□□□□□ -1.52
RGPD3A6NKT7 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.54□□□□□ -1.52
RGPD3A6NKT7 AC012671.1-201ENST00000451912 203 ntBASIC5.54□□□□□ -1.52
RGPD3A6NKT7 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.54□□□□□ -1.52
RGPD3A6NKT7 AC104164.2-201ENST00000496953 495 ntBASIC5.54□□□□□ -1.52
RGPD3A6NKT7 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.54□□□□□ -1.52
RGPD3A6NKT7 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.54□□□□□ -1.52
RGPD3A6NKT7 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.54□□□□□ -1.52
RGPD3A6NKT7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RGPD3A6NKT7 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RGPD3A6NKT7 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
RGPD3A6NKT7 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
RGPD3A6NKT7 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
RGPD3A6NKT7 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RGPD3A6NKT7 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RGPD3A6NKT7 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.53□□□□□ -1.52
RGPD3A6NKT7 CASC19-261ENST00000641853 1638 ntBASIC5.53□□□□□ -1.52
RGPD3A6NKT7 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RGPD3A6NKT7 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RGPD3A6NKT7 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RGPD3A6NKT7 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RGPD3A6NKT7 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms