Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 RPL35AP19-201ENST00000469425 329 ntBASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 HPRT1P2-201ENST00000505250 544 ntBASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 MRPS33P3-201ENST00000513456 322 ntBASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC138938.1-201ENST00000515431 782 ntBASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 RNU6-513P-201ENST00000516104 104 ntBASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 RNU6-941P-201ENST00000516346 108 ntBASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC109635.6-201ENST00000525487 1113 ntBASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 MTND2P26-201ENST00000528255 1029 ntBASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 LDHC-203ENST00000535809 757 ntTSL 5 BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 DUX4L52-201ENST00000549363 777 ntBASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC116553.2-201ENST00000564203 463 ntBASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 AL354943.1-201ENST00000572103 781 ntBASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 MTCYBP33-201ENST00000575007 1130 ntBASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 AP001269.3-201ENST00000588718 329 ntBASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC010487.1-201ENST00000594408 1172 ntBASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 OR8B1P-202ENST00000641132 1178 ntBASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 CASC19-281ENST00000642118 1554 ntBASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.85□□□□□ -1.63
TRBV5-3A0A0A0MS03 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 HSPA8P14-201ENST00000552265 1805 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 ZNF733P-202ENST00000444809 1573 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 RNU1-87P-201ENST00000363727 170 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 RNU4-7P-201ENST00000364758 141 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 UBBP2-201ENST00000376781 231 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 NUDT19P3-201ENST00000404698 555 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AL590084.1-201ENST00000407885 387 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 RPS3P2-201ENST00000421346 701 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC115283.1-201ENST00000427353 400 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 KCTD9P1-201ENST00000430462 1167 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 MOB1AP1-201ENST00000430903 535 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC012075.1-201ENST00000436549 580 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 CYCSP51-201ENST00000443545 318 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 MYO5BP2-201ENST00000449815 1277 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC019084.1-201ENST00000457337 432 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 PSMC1P13-201ENST00000458195 985 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 RNU7-140P-201ENST00000459546 60 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC084754.1-201ENST00000463466 464 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC007998.1-201ENST00000474156 672 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC126121.1-201ENST00000482313 553 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 TMEM97P2-201ENST00000517841 403 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 MTCO3P15-201ENST00000526563 574 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC126177.5-201ENST00000549599 178 ntBASIC4.84□□□□□ -1.63
TRBV5-3A0A0A0MS03 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms