Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC090236.2-201ENST00000587933 1101 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AL589765.6-201ENST00000601909 549 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AC005034.4-201ENST00000603612 899 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AL121932.1-201ENST00000605542 214 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AC010857.1-201ENST00000606398 594 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AC010424.2-201ENST00000607594 443 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AC243830.3-201ENST00000616810 376 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AC021755.1-201ENST00000559747 1447 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 BRAFP1-201ENST00000445336 2703 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AP002001.2-201ENST00000529025 1469 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AC021146.4-201ENST00000309229 279 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 RPS24-202ENST00000372360 510 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 RN7SKP108-201ENST00000411367 328 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AL590139.1-201ENST00000416267 400 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AL133173.1-201ENST00000423458 397 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 NEK4P1-201ENST00000433383 879 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AC010086.1-201ENST00000437359 1052 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 VN1R96P-201ENST00000446052 858 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AL935212.3-201ENST00000450729 284 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 RAD23BP3-201ENST00000454157 1152 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 RPS20P32-201ENST00000456044 356 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AC090142.1-201ENST00000465776 462 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 RN7SL456P-201ENST00000469290 295 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AC092185.1-201ENST00000491371 97 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 TXNP6-201ENST00000510190 310 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 SCARNA18.1-201ENST00000516330 83 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 RNA5SP373-201ENST00000517271 95 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AL133304.3-201ENST00000550089 477 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AL121576.1-201ENST00000556055 276 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AL049839.1-201ENST00000556151 657 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 RPA2P1-201ENST00000556557 721 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AC110743.1-201ENST00000584870 478 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 FO393422.1-201ENST00000603908 708 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AC107294.3-201ENST00000609211 526 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AL008582.1-201ENST00000609612 442 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AC138904.2-201ENST00000614412 107 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AL356274.1-201ENST00000617064 410 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AC006971.1-201ENST00000407916 4486 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 AC005183.1-201ENST00000603687 1979 ntBASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01558Q9Y6Z2 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms