Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 COTL1P1-201ENST00000422309 375 ntBASIC1.78□□□□□ -2.12
MACF1Q9UPN3 AP001992.1-205ENST00000462248 379 ntBASIC1.78□□□□□ -2.12
MACF1Q9UPN3 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 MIR3922-201ENST00000585192 84 ntBASIC1.78□□□□□ -2.12
MACF1Q9UPN3 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 AC104260.2-201ENST00000623551 3497 ntBASIC1.78□□□□□ -2.12
MACF1Q9UPN3 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 AC093591.2-201ENST00000565254 3843 ntBASIC1.78□□□□□ -2.12
MACF1Q9UPN3 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 NAV2-208ENST00000527559 11171 ntTSL 5 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 ATP2B2-203ENST00000383800 8900 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 DHX9P1-201ENST00000436565 3076 ntBASIC1.78□□□□□ -2.12
MACF1Q9UPN3 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 GSTA8P-201ENST00000404253 637 ntBASIC1.78□□□□□ -2.12
MACF1Q9UPN3 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 RN7SL812P-201ENST00000493791 279 ntBASIC1.78□□□□□ -2.12
MACF1Q9UPN3 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 GNG5P1-201ENST00000255500 204 ntBASIC1.78□□□□□ -2.12
MACF1Q9UPN3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 RNA5SP345-201ENST00000410646 108 ntBASIC1.78□□□□□ -2.12
MACF1Q9UPN3 GLUD1P9-201ENST00000420997 1173 ntBASIC1.78□□□□□ -2.12
MACF1Q9UPN3 AC003685.2-201ENST00000422795 395 ntBASIC1.78□□□□□ -2.12
MACF1Q9UPN3 AL451136.1-201ENST00000435399 325 ntBASIC1.78□□□□□ -2.12
MACF1Q9UPN3 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 NDUFB4P11-201ENST00000560510 395 ntBASIC1.78□□□□□ -2.12
MACF1Q9UPN3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 AC133552.1-201ENST00000569988 4007 ntBASIC1.78□□□□□ -2.12
MACF1Q9UPN3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 CR383656.14-201ENST00000551951 406 ntBASIC1.78□□□□□ -2.12
MACF1Q9UPN3 DPPA3P2-201ENST00000553589 478 ntBASIC1.78□□□□□ -2.12
MACF1Q9UPN3 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 LCOR-201ENST00000286067 4542 ntBASIC1.78□□□□□ -2.12
MACF1Q9UPN3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC1.78□□□□□ -2.12
MACF1Q9UPN3 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
MACF1Q9UPN3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
MACF1Q9UPN3 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
MACF1Q9UPN3 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.13
MACF1Q9UPN3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
MACF1Q9UPN3 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
MACF1Q9UPN3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.13
MACF1Q9UPN3 RPL5P18-201ENST00000406671 891 ntBASIC1.78□□□□□ -2.13
MACF1Q9UPN3 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC1.78□□□□□ -2.13
MACF1Q9UPN3 UBE2V1P1-201ENST00000430836 445 ntBASIC1.78□□□□□ -2.13
MACF1Q9UPN3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.78□□□□□ -2.13
MACF1Q9UPN3 BTF3P6-201ENST00000448054 499 ntBASIC1.78□□□□□ -2.13
MACF1Q9UPN3 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC1.78□□□□□ -2.13
MACF1Q9UPN3 AP005137.2-201ENST00000609238 400 ntBASIC1.78□□□□□ -2.13
MACF1Q9UPN3 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
MACF1Q9UPN3 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC1.78□□□□□ -2.13
MACF1Q9UPN3 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
MACF1Q9UPN3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
MACF1Q9UPN3 JPX-212ENST00000639185 9658 ntTSL 5 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms