Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC127029.1-201ENST00000560822 237 ntBASIC7.55□□□□□ -1.2
LHX6Q9UPM6 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 AL589765.5-201ENST00000596133 515 ntBASIC7.55□□□□□ -1.2
LHX6Q9UPM6 FAM27E4-201ENST00000605259 342 ntBASIC7.55□□□□□ -1.2
LHX6Q9UPM6 AC103710.2-201ENST00000609912 942 ntBASIC7.55□□□□□ -1.2
LHX6Q9UPM6 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 AC027559.1-201ENST00000636288 271 ntBASIC7.55□□□□□ -1.2
LHX6Q9UPM6 AC073869.10-201ENST00000642016 354 ntBASIC7.55□□□□□ -1.2
LHX6Q9UPM6 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 EIF4BP4-201ENST00000441847 1780 ntBASIC7.55□□□□□ -1.2
LHX6Q9UPM6 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 LINC00558-201ENST00000569422 3163 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LHX6Q9UPM6 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 TTC6-203ENST00000476979 2253 ntTSL 2 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 TRIM55-204ENST00000353317 2624 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 RN7SKP250-201ENST00000363924 321 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 RNU4-50P-201ENST00000364361 141 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 MIR146B-201ENST00000365699 73 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 HMGB3P7-201ENST00000400214 611 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 AC097374.1-203ENST00000400783 485 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 RNU2-25P-201ENST00000411041 191 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 MICG-208ENST00000416822 132 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 AL360081.1-201ENST00000428299 555 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 RPL12P4-201ENST00000432629 497 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 EIF5AP4-201ENST00000441206 465 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 AL031584.1-201ENST00000447169 754 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 AC009244.1-201ENST00000450566 258 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 AL357127.1-201ENST00000451295 438 ntTSL 3 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 RPL12P32-201ENST00000484010 494 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 RPL7AP26-201ENST00000488538 813 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 AC008799.1-201ENST00000495909 457 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 HSPD1P18-201ENST00000504252 244 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 RNU6-397P-201ENST00000516226 104 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 RNU6-62P-201ENST00000516526 102 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 AC007991.1-201ENST00000522680 631 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 AC131935.1-201ENST00000524621 333 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 TXNRD1-208ENST00000525566 3836 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 AP001858.2-201ENST00000536213 601 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 SETP2-201ENST00000553886 926 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 RPS27AP19-201ENST00000597285 458 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 AL021918.2-201ENST00000613415 194 ntBASIC7.54□□□□□ -1.2
LHX6Q9UPM6 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 CALCOCO2-201ENST00000258947 3682 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC7.54□□□□□ -1.2
LHX6Q9UPM6 AC008522.1-201ENST00000639479 2906 ntBASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms