Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 SNORA79B-201ENST00000410557 148 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 AC244453.4-201ENST00000419150 388 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 UQCRBP1-201ENST00000421129 336 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 AC006065.1-201ENST00000422539 802 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 AC009480.2-201ENST00000422916 432 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 EIF4HP2-201ENST00000424380 563 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 CENPIP1-201ENST00000425713 902 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 YWHAZP2-201ENST00000440317 728 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 RPL31P20-201ENST00000449593 360 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 RNU6-599P-201ENST00000459383 107 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 RNU6-1193P-201ENST00000459461 107 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 AC104763.1-201ENST00000475274 360 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 AC007016.1-201ENST00000512110 244 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 RNU6-751P-201ENST00000516382 101 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 SEC11B-201ENST00000518383 499 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 AC009268.1-201ENST00000561352 1203 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 RPL12P25-202ENST00000598100 674 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 AC093765.1-201ENST00000603758 881 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 AL133338.2-201ENST00000604292 736 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 RNU6-368P-201ENST00000620928 107 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 RNU6-538P-201ENST00000622329 107 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 OR14L1P-202ENST00000641545 3009 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 AP001642.1-201ENST00000624727 2117 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 AC139713.2-215ENST00000641428 5037 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 AL136164.3-201ENST00000624429 3978 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 RNA5SP105-201ENST00000391123 113 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 RNU6-564P-201ENST00000410983 104 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 ELOCP19-201ENST00000411919 318 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 CKS1BP6-201ENST00000424932 240 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 RPEP3-201ENST00000425462 676 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 RPL18P10-201ENST00000425606 538 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 MAPRE1P3-201ENST00000435438 796 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 AC004938.1-201ENST00000438468 308 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 RHEBP2-201ENST00000450289 600 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 AC090686.1-201ENST00000481577 749 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 AC034205.1-201ENST00000520621 638 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 AP001781.1-201ENST00000530977 207 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 AC069061.3-201ENST00000582254 823 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 RPL26P30-202ENST00000602923 645 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 AC008782.1-201ENST00000603386 430 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 AC012213.4-201ENST00000606457 354 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 AC100847.1-201ENST00000611316 481 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 AC015914.2-201ENST00000618167 288 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 AC015722.2-201ENST00000622210 551 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 MIR6810-201ENST00000622701 70 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 DHX9P1-201ENST00000436565 3076 ntBASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.14□□□□□ -1.75
CLCF1Q9UBD9 AL137100.1-201ENST00000556703 1620 ntBASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 AC021146.4-201ENST00000309229 279 ntBASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms