Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC092608.3-201ENST00000625017 386 ntBASIC5.11□□□□□ -1.59
SNX18Q96RF0 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.11□□□□□ -1.59
SNX18Q96RF0 SNORA17.5-201ENST00000630429 132 ntBASIC5.11□□□□□ -1.59
SNX18Q96RF0 AC099654.6-201ENST00000636487 512 ntBASIC5.11□□□□□ -1.59
SNX18Q96RF0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SNX18Q96RF0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX18Q96RF0 GTF2H2B-203ENST00000508065 1432 ntBASIC5.11□□□□□ -1.59
SNX18Q96RF0 AC021755.1-201ENST00000559747 1447 ntBASIC5.11□□□□□ -1.59
SNX18Q96RF0 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
SNX18Q96RF0 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX18Q96RF0 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.11□□□□□ -1.59
SNX18Q96RF0 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX18Q96RF0 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.11□□□□□ -1.59
SNX18Q96RF0 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.11□□□□□ -1.59
SNX18Q96RF0 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
SNX18Q96RF0 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX18Q96RF0 AL031595.2-201ENST00000624215 19071 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 AC104623.2-202ENST00000623477 4002 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX18Q96RF0 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX18Q96RF0 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX18Q96RF0 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX18Q96RF0 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNX18Q96RF0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNX18Q96RF0 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 AL121886.1-201ENST00000358609 435 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX18Q96RF0 RNU6-413P-201ENST00000384115 107 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX18Q96RF0 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNX18Q96RF0 RNA5SP178-201ENST00000410380 128 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 RN7SKP206-201ENST00000410823 293 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 CCT8P1-201ENST00000413611 1657 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 SOCS5P3-201ENST00000425115 1576 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 AL390023.1-201ENST00000428836 262 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNX18Q96RF0 TMEM183AP1-205ENST00000432739 290 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 COX7BP2-201ENST00000437976 242 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 AL445567.1-201ENST00000439121 144 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 AC092393.1-201ENST00000439625 742 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX18Q96RF0 ARL4AP3-201ENST00000441452 574 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 AC234781.3-201ENST00000452540 973 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNX18Q96RF0 MTND2P28-201ENST00000457540 1044 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 RPS27AP2-201ENST00000457576 465 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 RNA5SP103-201ENST00000459503 118 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 RAP1BP2-201ENST00000478270 544 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 PPIAP19-201ENST00000486414 492 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 RN7SL193P-201ENST00000491708 276 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 AL049874.2-201ENST00000492636 288 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 RN7SL101P-201ENST00000496350 279 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNX18Q96RF0 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 FABP5P12-201ENST00000515543 389 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 AP000648.1-201ENST00000529682 397 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 PCNAP4-201ENST00000532690 730 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 PDCL2P2-201ENST00000533651 189 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNX18Q96RF0 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX18Q96RF0 AC006530.1-201ENST00000555980 571 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 AC090888.1-201ENST00000561335 1141 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 LINC01963-201ENST00000562038 3148 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 AC022662.1-201ENST00000580252 331 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 AC011445.2-201ENST00000599274 173 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 AL031601.1-201ENST00000605702 394 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 AL450489.1-201ENST00000612071 468 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 STMN1P1-201ENST00000617809 440 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 AC127024.6-201ENST00000621598 424 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.1□□□□□ -1.59
SNX18Q96RF0 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 SAMMSON-213ENST00000641336 1521 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms