Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RPL7P59-201ENST00000447700 943 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 RPL34P34-201ENST00000465389 354 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 RN7SL332P-201ENST00000482163 254 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 GZMAP1-201ENST00000503054 631 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 AC027309.2-201ENST00000520566 192 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 AP003072.2-201ENST00000527756 676 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 OR4R1P-201ENST00000529879 463 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 AC008521.2-201ENST00000591021 259 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 AC010325.3-201ENST00000641084 394 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 AC138207.6-201ENST00000579164 1967 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
LRCH3Q96II8 MITF-203ENST00000328528 4680 ntTSL 5 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 ARHGAP42P5-201ENST00000548856 2936 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
LRCH3Q96II8 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
LRCH3Q96II8 AC018992.1-201ENST00000523778 2149 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
LRCH3Q96II8 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LRCH3Q96II8 OR2AH1P-202ENST00000641232 2744 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LRCH3Q96II8 GTF2H2B-203ENST00000508065 1432 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LRCH3Q96II8 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
LRCH3Q96II8 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LRCH3Q96II8 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LRCH3Q96II8 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LRCH3Q96II8 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LRCH3Q96II8 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LRCH3Q96II8 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
LRCH3Q96II8 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
LRCH3Q96II8 AC102941.1-201ENST00000567616 1537 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 Y_RNA.46-201ENST00000362695 102 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 Y_RNA.373-201ENST00000365600 103 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 RNU6-98P-201ENST00000384173 107 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 RNU6-1013P-201ENST00000384180 107 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 Y_RNA.512-201ENST00000384518 102 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 MIR1-2-201ENST00000384961 85 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 SNORD37.1-201ENST00000390968 65 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 FDPSP5-201ENST00000399474 1057 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 AL121972.1-201ENST00000402023 252 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LRCH3Q96II8 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 UQCRBP1-201ENST00000421129 336 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 AL161722.2-201ENST00000434731 981 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 AC104849.1-201ENST00000462623 405 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 RPL22P13-201ENST00000493291 347 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LRCH3Q96II8 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 RNU4-29P-201ENST00000515943 174 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 RNA5SP287-201ENST00000516358 103 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 RNA5SP441-201ENST00000516809 88 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 RN7SKP11-201ENST00000517018 287 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 RNU6-1220P-201ENST00000517126 108 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 IGKV2-29-201ENST00000521304 372 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 OR5M6P-201ENST00000530227 937 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LRCH3Q96II8 AC068831.4-201ENST00000556118 109 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 AC020634.1-201ENST00000608701 549 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 AC141273.2-201ENST00000618989 130 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 AC010149.2-201ENST00000637608 315 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LRCH3Q96II8 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LRCH3Q96II8 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LRCH3Q96II8 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LRCH3Q96II8 PNPT1P2-201ENST00000456768 2050 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
LRCH3Q96II8 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LRCH3Q96II8 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
LRCH3Q96II8 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 MTND5P30-201ENST00000452896 1731 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
LRCH3Q96II8 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LRCH3Q96II8 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms