Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 RNU1-20P-201ENST00000363314 162 ntBASIC7.22□□□□□ -1.25
TOPBP1Q92547 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC7.22□□□□□ -1.25
TOPBP1Q92547 AL356968.2-201ENST00000412769 1257 ntBASIC7.22□□□□□ -1.25
TOPBP1Q92547 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.22□□□□□ -1.25
TOPBP1Q92547 ATP5G1P3-201ENST00000463301 410 ntBASIC7.22□□□□□ -1.25
TOPBP1Q92547 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC7.22□□□□□ -1.25
TOPBP1Q92547 AC010201.1-201ENST00000605051 540 ntBASIC7.22□□□□□ -1.25
TOPBP1Q92547 AP002360.3-201ENST00000607673 710 ntBASIC7.22□□□□□ -1.25
TOPBP1Q92547 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TOPBP1Q92547 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC7.21□□□□□ -1.25
TOPBP1Q92547 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
TOPBP1Q92547 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
TOPBP1Q92547 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.25
TOPBP1Q92547 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
TOPBP1Q92547 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
TOPBP1Q92547 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.21□□□□□ -1.25
TOPBP1Q92547 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.25
TOPBP1Q92547 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
TOPBP1Q92547 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TOPBP1Q92547 ADAM5-202ENST00000399789 1942 ntBASIC7.21□□□□□ -1.26
TOPBP1Q92547 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC7.21□□□□□ -1.26
TOPBP1Q92547 U8.11-201ENST00000384699 133 ntBASIC7.21□□□□□ -1.26
TOPBP1Q92547 U8.12-201ENST00000384701 133 ntBASIC7.21□□□□□ -1.26
TOPBP1Q92547 MIR200C-201ENST00000384980 68 ntBASIC7.21□□□□□ -1.26
TOPBP1Q92547 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC7.21□□□□□ -1.26
TOPBP1Q92547 SERPINA7P1-201ENST00000443077 631 ntBASIC7.21□□□□□ -1.26
TOPBP1Q92547 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC7.21□□□□□ -1.26
TOPBP1Q92547 U8.18-201ENST00000459285 133 ntBASIC7.21□□□□□ -1.26
TOPBP1Q92547 RPL35AP15-201ENST00000468042 339 ntBASIC7.21□□□□□ -1.26
TOPBP1Q92547 RPL7P49-201ENST00000471402 708 ntBASIC7.21□□□□□ -1.26
TOPBP1Q92547 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC7.21□□□□□ -1.26
TOPBP1Q92547 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC7.21□□□□□ -1.26
TOPBP1Q92547 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC7.21□□□□□ -1.26
TOPBP1Q92547 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC7.21□□□□□ -1.26
TOPBP1Q92547 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC7.21□□□□□ -1.26
TOPBP1Q92547 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
TOPBP1Q92547 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TOPBP1Q92547 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
TOPBP1Q92547 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
TOPBP1Q92547 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TOPBP1Q92547 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
TOPBP1Q92547 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TOPBP1Q92547 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC7.2□□□□□ -1.26
TOPBP1Q92547 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC7.2□□□□□ -1.26
TOPBP1Q92547 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC7.2□□□□□ -1.26
TOPBP1Q92547 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
TOPBP1Q92547 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TOPBP1Q92547 MIR7-3-201ENST00000384898 110 ntBASIC7.2□□□□□ -1.26
TOPBP1Q92547 AMMECR1LP1-201ENST00000415152 841 ntBASIC7.2□□□□□ -1.26
TOPBP1Q92547 AC068533.1-201ENST00000418542 415 ntBASIC7.2□□□□□ -1.26
TOPBP1Q92547 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC7.2□□□□□ -1.26
TOPBP1Q92547 NANOGP10-201ENST00000453325 895 ntBASIC7.2□□□□□ -1.26
TOPBP1Q92547 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC7.2□□□□□ -1.26
TOPBP1Q92547 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.2□□□□□ -1.26
TOPBP1Q92547 AC120057.2-201ENST00000571520 271 ntBASIC7.2□□□□□ -1.26
TOPBP1Q92547 AC087499.8-201ENST00000578406 226 ntBASIC7.2□□□□□ -1.26
TOPBP1Q92547 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TOPBP1Q92547 CASC19-284ENST00000642142 1868 ntBASIC7.2□□□□□ -1.26
TOPBP1Q92547 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
TOPBP1Q92547 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TOPBP1Q92547 AC092376.2-201ENST00000622621 4116 ntBASIC7.2□□□□□ -1.26
TOPBP1Q92547 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
TOPBP1Q92547 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.2□□□□□ -1.26
TOPBP1Q92547 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
TOPBP1Q92547 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
TOPBP1Q92547 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
TOPBP1Q92547 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC7.2□□□□□ -1.26
TOPBP1Q92547 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TOPBP1Q92547 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TOPBP1Q92547 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TOPBP1Q92547 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
TOPBP1Q92547 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TOPBP1Q92547 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TOPBP1Q92547 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC7.19□□□□□ -1.26
TOPBP1Q92547 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TOPBP1Q92547 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC7.19□□□□□ -1.26
TOPBP1Q92547 SRGNP1-201ENST00000603392 451 ntBASIC7.19□□□□□ -1.26
TOPBP1Q92547 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC7.19□□□□□ -1.26
TOPBP1Q92547 FAM91A3P-201ENST00000456826 2544 ntBASIC7.19□□□□□ -1.26
TOPBP1Q92547 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TOPBP1Q92547 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
TOPBP1Q92547 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TOPBP1Q92547 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
TOPBP1Q92547 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
TOPBP1Q92547 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC7.18□□□□□ -1.26
TOPBP1Q92547 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
TOPBP1Q92547 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
TOPBP1Q92547 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC7.18□□□□□ -1.26
TOPBP1Q92547 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TOPBP1Q92547 AL080315.1-201ENST00000406055 466 ntBASIC7.18□□□□□ -1.26
TOPBP1Q92547 RNU4-6P-201ENST00000410804 122 ntBASIC7.18□□□□□ -1.26
TOPBP1Q92547 PTMAP3-201ENST00000447474 330 ntBASIC7.18□□□□□ -1.26
TOPBP1Q92547 RPL7P15-201ENST00000461190 712 ntBASIC7.18□□□□□ -1.26
TOPBP1Q92547 AC020890.1-201ENST00000491837 504 ntBASIC7.18□□□□□ -1.26
TOPBP1Q92547 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC7.18□□□□□ -1.26
TOPBP1Q92547 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
TOPBP1Q92547 MIR4298-201ENST00000584380 73 ntBASIC7.18□□□□□ -1.26
TOPBP1Q92547 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC7.18□□□□□ -1.26
TOPBP1Q92547 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
TOPBP1Q92547 AC016588.2-201ENST00000632484 3021 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms