Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH3P22223 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH3P22223 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH3P22223 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CDH3P22223 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH3P22223 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.88□□□□□ -1.63
CDH3P22223 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CDH3P22223 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CDH3P22223 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH3P22223 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH3P22223 AL109941.1-201ENST00000401925 229 ntBASIC4.88□□□□□ -1.63
CDH3P22223 AL133270.1-201ENST00000402635 279 ntBASIC4.88□□□□□ -1.63
CDH3P22223 Z86062.1-201ENST00000406773 777 ntBASIC4.88□□□□□ -1.63
CDH3P22223 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.88□□□□□ -1.63
CDH3P22223 AC093084.1-201ENST00000424233 687 ntBASIC4.88□□□□□ -1.63
CDH3P22223 MORF4L1P7-201ENST00000426038 703 ntBASIC4.88□□□□□ -1.63
CDH3P22223 AC009238.2-201ENST00000431026 355 ntBASIC4.88□□□□□ -1.63
CDH3P22223 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH3P22223 AL357520.1-201ENST00000441557 453 ntBASIC4.88□□□□□ -1.63
CDH3P22223 AL627224.1-201ENST00000448334 444 ntBASIC4.88□□□□□ -1.63
CDH3P22223 TRY2P-201ENST00000448860 689 ntBASIC4.88□□□□□ -1.63
CDH3P22223 CLIC4P1-201ENST00000453177 535 ntBASIC4.88□□□□□ -1.63
CDH3P22223 AL354710.1-201ENST00000453641 246 ntBASIC4.88□□□□□ -1.63
CDH3P22223 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH3P22223 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.88□□□□□ -1.63
CDH3P22223 AC108729.2-201ENST00000476543 840 ntBASIC4.88□□□□□ -1.63
CDH3P22223 AC093663.2-201ENST00000484625 313 ntBASIC4.88□□□□□ -1.63
CDH3P22223 HMGB1P3-201ENST00000502802 616 ntBASIC4.88□□□□□ -1.63
CDH3P22223 AC140172.1-201ENST00000502928 141 ntBASIC4.88□□□□□ -1.63
CDH3P22223 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.88□□□□□ -1.63
CDH3P22223 AC106806.2-201ENST00000509365 500 ntBASIC4.88□□□□□ -1.63
CDH3P22223 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH3P22223 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH3P22223 HMGB1P46-201ENST00000520062 610 ntBASIC4.88□□□□□ -1.63
CDH3P22223 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH3P22223 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH3P22223 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH3P22223 AC011840.5-201ENST00000582125 771 ntBASIC4.88□□□□□ -1.63
CDH3P22223 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH3P22223 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH3P22223 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH3P22223 AP004372.1-201ENST00000604842 844 ntBASIC4.88□□□□□ -1.63
CDH3P22223 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH3P22223 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH3P22223 AL627230.1-201ENST00000613077 211 ntBASIC4.88□□□□□ -1.63
CDH3P22223 AL591926.8-201ENST00000616876 211 ntBASIC4.88□□□□□ -1.63
CDH3P22223 BMS1P21-201ENST00000634565 365 ntBASIC4.88□□□□□ -1.63
CDH3P22223 OR5AC4P-202ENST00000642086 985 ntBASIC4.88□□□□□ -1.63
CDH3P22223 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH3P22223 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH3P22223 AC015813.6-201ENST00000624409 5808 ntBASIC4.88□□□□□ -1.63
CDH3P22223 INTS6P1-201ENST00000504674 2530 ntBASIC4.88□□□□□ -1.63
CDH3P22223 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH3P22223 AC073429.2-201ENST00000569694 1444 ntBASIC4.88□□□□□ -1.63
CDH3P22223 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CDH3P22223 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH3P22223 AC053481.2-202ENST00000582394 1500 ntBASIC4.87□□□□□ -1.63
CDH3P22223 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH3P22223 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CDH3P22223 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH3P22223 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH3P22223 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH3P22223 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH3P22223 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH3P22223 RN7SKP103-201ENST00000363848 320 ntBASIC4.87□□□□□ -1.63
CDH3P22223 RNA5SP428-201ENST00000365129 132 ntBASIC4.87□□□□□ -1.63
CDH3P22223 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH3P22223 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH3P22223 SNORA51.8-201ENST00000384234 132 ntBASIC4.87□□□□□ -1.63
CDH3P22223 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH3P22223 MIR937-201ENST00000401271 86 ntBASIC4.87□□□□□ -1.63
CDH3P22223 AL035079.1-201ENST00000405210 287 ntBASIC4.87□□□□□ -1.63
CDH3P22223 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH3P22223 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH3P22223 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.87□□□□□ -1.63
CDH3P22223 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH3P22223 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH3P22223 RPS20P1-201ENST00000434853 354 ntBASIC4.87□□□□□ -1.63
CDH3P22223 RHOT1P3-201ENST00000436571 331 ntBASIC4.87□□□□□ -1.63
CDH3P22223 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.87□□□□□ -1.63
CDH3P22223 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH3P22223 PA2G4P6-201ENST00000438325 1197 ntBASIC4.87□□□□□ -1.63
CDH3P22223 AC007000.2-201ENST00000442564 487 ntBASIC4.87□□□□□ -1.63
CDH3P22223 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH3P22223 OR7E125P-201ENST00000443450 846 ntBASIC4.87□□□□□ -1.63
CDH3P22223 AL137845.2-201ENST00000444292 988 ntBASIC4.87□□□□□ -1.63
CDH3P22223 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH3P22223 HIGD1AP8-201ENST00000453927 274 ntBASIC4.87□□□□□ -1.63
CDH3P22223 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH3P22223 RN7SL319P-201ENST00000480656 221 ntBASIC4.87□□□□□ -1.63
CDH3P22223 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH3P22223 AC231760.1-201ENST00000498002 260 ntBASIC4.87□□□□□ -1.63
CDH3P22223 AC021087.2-201ENST00000504656 1203 ntBASIC4.87□□□□□ -1.63
CDH3P22223 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH3P22223 TCP11X3P-202ENST00000514289 1254 ntBASIC4.87□□□□□ -1.63
CDH3P22223 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.87□□□□□ -1.63
CDH3P22223 AC134698.5-201ENST00000519444 336 ntBASIC4.87□□□□□ -1.63
CDH3P22223 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.87□□□□□ -1.63
CDH3P22223 CR383656.14-201ENST00000551951 406 ntBASIC4.87□□□□□ -1.63
CDH3P22223 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms