Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HOXC4P09017 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC4P09017 AC005332.5-201ENST00000591222 2919 ntBASIC4.5□□□□□ -1.69
HOXC4P09017 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HOXC4P09017 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC4P09017 SMG1P4-204ENST00000523028 4131 ntBASIC4.5□□□□□ -1.69
HOXC4P09017 AL672167.1-204ENST00000641875 3017 ntBASIC4.5□□□□□ -1.69
HOXC4P09017 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC4P09017 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC4P09017 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXC4P09017 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC4P09017 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC4P09017 A2MP1-204ENST00000566278 4130 ntBASIC4.49□□□□□ -1.69
HOXC4P09017 CPHL1P-201ENST00000461341 3407 ntBASIC4.49□□□□□ -1.69
HOXC4P09017 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HOXC4P09017 LINC00622-201ENST00000562811 1570 ntBASIC4.49□□□□□ -1.69
HOXC4P09017 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HOXC4P09017 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXC4P09017 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC4P09017 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXC4P09017 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HOXC4P09017 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC4P09017 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC4P09017 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC4P09017 U3.22-201ENST00000391120 215 ntBASIC4.49□□□□□ -1.69
HOXC4P09017 RPL23AP59-201ENST00000399415 461 ntBASIC4.49□□□□□ -1.69
HOXC4P09017 AC098592.2-201ENST00000413158 265 ntBASIC4.49□□□□□ -1.69
HOXC4P09017 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC4P09017 RAD23BP1-201ENST00000421404 1227 ntBASIC4.49□□□□□ -1.69
HOXC4P09017 AL592293.2-201ENST00000422292 996 ntBASIC4.49□□□□□ -1.69
HOXC4P09017 TRGV7-201ENST00000427089 353 ntBASIC4.49□□□□□ -1.69
HOXC4P09017 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXC4P09017 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC4P09017 RPL7P33-201ENST00000444159 742 ntBASIC4.49□□□□□ -1.69
HOXC4P09017 AL591363.1-201ENST00000450091 483 ntBASIC4.49□□□□□ -1.69
HOXC4P09017 RPL10P17-201ENST00000453852 316 ntBASIC4.49□□□□□ -1.69
HOXC4P09017 AL591473.1-201ENST00000464297 313 ntBASIC4.49□□□□□ -1.69
HOXC4P09017 RPS23P7-201ENST00000466210 444 ntBASIC4.49□□□□□ -1.69
HOXC4P09017 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC4P09017 AC013356.1-201ENST00000489027 564 ntBASIC4.49□□□□□ -1.69
HOXC4P09017 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC4P09017 AC091917.2-201ENST00000505002 744 ntBASIC4.49□□□□□ -1.69
HOXC4P09017 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXC4P09017 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.49□□□□□ -1.69
HOXC4P09017 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.49□□□□□ -1.69
HOXC4P09017 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC4P09017 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXC4P09017 HMGB2P1-201ENST00000591146 634 ntBASIC4.49□□□□□ -1.69
HOXC4P09017 AC005520.3-201ENST00000602874 370 ntBASIC4.49□□□□□ -1.69
HOXC4P09017 AC105105.5-201ENST00000622635 1294 ntBASIC4.49□□□□□ -1.69
HOXC4P09017 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXC4P09017 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXC4P09017 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC4P09017 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC4P09017 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC4P09017 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC4P09017 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HOXC4P09017 SALL4P2-201ENST00000423288 2910 ntBASIC4.49□□□□□ -1.69
HOXC4P09017 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXC4P09017 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC4P09017 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HOXC4P09017 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HOXC4P09017 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC4P09017 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC4P09017 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HOXC4P09017 OR51C1P-202ENST00000641159 1444 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 AC026951.1-201ENST00000559530 2459 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXC4P09017 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC4P09017 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC4P09017 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HOXC4P09017 UGT2B26P-201ENST00000508672 1613 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC4P09017 AC126755.2-208ENST00000327792 462 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 AC138969.1-213ENST00000331436 462 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXC4P09017 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
HOXC4P09017 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC4P09017 MIR659-201ENST00000384963 97 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HOXC4P09017 VN1R31P-201ENST00000417498 730 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXC4P09017 RPL7AP25-201ENST00000423357 805 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 RPL21P43-201ENST00000425440 472 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 AP001324.1-201ENST00000428553 399 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 NFYAP1-201ENST00000431953 972 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 RPL23AP93-201ENST00000440847 484 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 HMGB3P9-201ENST00000441799 583 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXC4P09017 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC4P09017 AC053481.1-201ENST00000467217 306 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 AK4P6-201ENST00000505168 528 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
HOXC4P09017 HPRT1P1-201ENST00000509498 657 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXC4P09017 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC4P09017 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HOXC4P09017 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC4P09017 DUX4L52-201ENST00000549363 777 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 AL358913.1-201ENST00000554342 121 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms