Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.32□□□□□ -1.56
COL1A1P02452 AC108751.2-201ENST00000469993 231 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 USP9YP2-201ENST00000504503 1000 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 PGBD4P4-201ENST00000509673 613 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.32□□□□□ -1.56
COL1A1P02452 USP9YP1-201ENST00000513521 1002 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL1A1P02452 MIR4472-2-201ENST00000582069 67 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 AC091178.1-203ENST00000584586 279 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.32□□□□□ -1.56
COL1A1P02452 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.32□□□□□ -1.56
COL1A1P02452 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
COL1A1P02452 AC234782.5-201ENST00000617723 324 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 TMEM30CP-203ENST00000637814 1035 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL1A1P02452 GVINP1-202ENST00000531871 7271 ntBASIC5.31□□□□□ -1.56
COL1A1P02452 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL1A1P02452 LARP1BP1-201ENST00000506036 1359 ntBASIC5.31□□□□□ -1.56
COL1A1P02452 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL1A1P02452 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL1A1P02452 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.31□□□□□ -1.56
COL1A1P02452 AP000641.1-201ENST00000531988 1639 ntBASIC5.31□□□□□ -1.56
COL1A1P02452 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.31□□□□□ -1.56
COL1A1P02452 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
COL1A1P02452 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL1A1P02452 AL672167.1-205ENST00000641112 3080 ntBASIC5.31□□□□□ -1.56
COL1A1P02452 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.31□□□□□ -1.56
COL1A1P02452 MIR3065-201ENST00000390137 79 ntBASIC5.31□□□□□ -1.56
COL1A1P02452 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
COL1A1P02452 MIR921-201ENST00000401133 56 ntBASIC5.31□□□□□ -1.56
COL1A1P02452 AL359643.1-201ENST00000404109 423 ntBASIC5.31□□□□□ -1.56
COL1A1P02452 AL035696.2-201ENST00000407941 709 ntBASIC5.31□□□□□ -1.56
COL1A1P02452 SNORA11.2-201ENST00000408318 127 ntBASIC5.31□□□□□ -1.56
COL1A1P02452 MIR1271-201ENST00000408537 86 ntBASIC5.31□□□□□ -1.56
COL1A1P02452 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.31□□□□□ -1.56
COL1A1P02452 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.31□□□□□ -1.56
COL1A1P02452 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.31□□□□□ -1.56
COL1A1P02452 AL591473.1-201ENST00000464297 313 ntBASIC5.31□□□□□ -1.56
COL1A1P02452 RPS27AP13-201ENST00000498403 237 ntBASIC5.31□□□□□ -1.56
COL1A1P02452 SAP18P1-201ENST00000512058 390 ntBASIC5.31□□□□□ -1.56
COL1A1P02452 AC138938.1-201ENST00000515431 782 ntBASIC5.31□□□□□ -1.56
COL1A1P02452 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.31□□□□□ -1.56
COL1A1P02452 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.31□□□□□ -1.56
COL1A1P02452 AC022916.3-201ENST00000592961 742 ntBASIC5.31□□□□□ -1.56
COL1A1P02452 COX6CP4-201ENST00000605798 228 ntBASIC5.31□□□□□ -1.56
COL1A1P02452 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.31□□□□□ -1.56
COL1A1P02452 NXPH1-205ENST00000602349 1953 ntBASIC5.31□□□□□ -1.56
COL1A1P02452 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
COL1A1P02452 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
COL1A1P02452 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.3□□□□□ -1.56
COL1A1P02452 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
COL1A1P02452 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
COL1A1P02452 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL1A1P02452 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL1A1P02452 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL1A1P02452 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
COL1A1P02452 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
COL1A1P02452 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
COL1A1P02452 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL1A1P02452 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
COL1A1P02452 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.3□□□□□ -1.56
COL1A1P02452 RNU6-628P-201ENST00000410675 107 ntBASIC5.3□□□□□ -1.56
COL1A1P02452 LINC01881-201ENST00000416103 412 ntBASIC5.3□□□□□ -1.56
COL1A1P02452 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.3□□□□□ -1.56
COL1A1P02452 AC006946.1-201ENST00000429106 328 ntBASIC5.3□□□□□ -1.56
COL1A1P02452 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.3□□□□□ -1.56
COL1A1P02452 AL132838.2-201ENST00000492041 314 ntBASIC5.3□□□□□ -1.56
COL1A1P02452 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.3□□□□□ -1.56
COL1A1P02452 AP001804.2-201ENST00000533932 910 ntBASIC5.3□□□□□ -1.56
COL1A1P02452 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.3□□□□□ -1.56
COL1A1P02452 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.3□□□□□ -1.56
COL1A1P02452 AC005034.4-201ENST00000603612 899 ntBASIC5.3□□□□□ -1.56
COL1A1P02452 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL1A1P02452 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.3□□□□□ -1.56
COL1A1P02452 AC017104.4-201ENST00000636283 1592 ntBASIC5.3□□□□□ -1.56
COL1A1P02452 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.3□□□□□ -1.56
COL1A1P02452 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
COL1A1P02452 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL1A1P02452 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL1A1P02452 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL1A1P02452 AC027228.2-201ENST00000567141 2154 ntBASIC5.3□□□□□ -1.56
COL1A1P02452 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL1A1P02452 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
COL1A1P02452 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL1A1P02452 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL1A1P02452 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.29□□□□□ -1.56
COL1A1P02452 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
COL1A1P02452 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.29□□□□□ -1.56
COL1A1P02452 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL1A1P02452 RPS20P14-201ENST00000412545 360 ntBASIC5.29□□□□□ -1.56
COL1A1P02452 RAB9AP4-201ENST00000415230 609 ntBASIC5.29□□□□□ -1.56
COL1A1P02452 TRGV7-201ENST00000427089 353 ntBASIC5.29□□□□□ -1.56
COL1A1P02452 AL451062.2-201ENST00000427515 271 ntBASIC5.29□□□□□ -1.56
COL1A1P02452 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL1A1P02452 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.29□□□□□ -1.56
COL1A1P02452 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.29□□□□□ -1.56
COL1A1P02452 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.29□□□□□ -1.56
COL1A1P02452 MTCO1P49-201ENST00000523429 802 ntBASIC5.29□□□□□ -1.56
COL1A1P02452 OR5BC1P-201ENST00000529327 739 ntBASIC5.29□□□□□ -1.56
COL1A1P02452 AL122126.1-201ENST00000546905 1318 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms