Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 TLK1P1-201ENST00000456760 2440 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLPTM1O96005 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLPTM1O96005 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLPTM1O96005 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.67□□□□□ -1.66
CLPTM1O96005 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CLPTM1O96005 HSPD1P11-201ENST00000508643 1702 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLPTM1O96005 AL356317.1-201ENST00000396110 1436 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLPTM1O96005 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CLPTM1O96005 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.67□□□□□ -1.66
CLPTM1O96005 RNA5SP335-201ENST00000363817 110 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 RNU6-1251P-201ENST00000364502 107 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 SNORA66-201ENST00000384792 133 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 LAP3P1-201ENST00000403648 294 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 AL133388.1-201ENST00000404509 287 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 RNU2-50P-201ENST00000410494 143 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.67□□□□□ -1.66
CLPTM1O96005 AL160275.2-201ENST00000412010 394 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.67□□□□□ -1.66
CLPTM1O96005 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.67□□□□□ -1.66
CLPTM1O96005 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.67□□□□□ -1.66
CLPTM1O96005 SLC35E1P1-201ENST00000419313 864 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 SRSF1P1-201ENST00000424058 520 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.67□□□□□ -1.66
CLPTM1O96005 PPIAP13-201ENST00000434706 478 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 GSTM5P1-201ENST00000434751 660 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 AL353597.2-202ENST00000434901 373 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 AL645638.1-201ENST00000440519 361 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 SPRYD7P1-201ENST00000443861 570 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 CCDC75P1-201ENST00000469247 791 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 RN7SL41P-201ENST00000476144 297 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 RN7SL423P-201ENST00000486202 304 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 RPS4XP18-201ENST00000495480 763 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 HMGB1P3-201ENST00000502802 616 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.67□□□□□ -1.66
CLPTM1O96005 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.67□□□□□ -1.66
CLPTM1O96005 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.67□□□□□ -1.66
CLPTM1O96005 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.67□□□□□ -1.66
CLPTM1O96005 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.67□□□□□ -1.66
CLPTM1O96005 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.67□□□□□ -1.66
CLPTM1O96005 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.67□□□□□ -1.66
CLPTM1O96005 UBTFL9-201ENST00000534504 1148 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 AC093014.1-201ENST00000548926 724 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLPTM1O96005 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.67□□□□□ -1.66
CLPTM1O96005 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.67□□□□□ -1.66
CLPTM1O96005 HMGB3P26-201ENST00000560051 582 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.67□□□□□ -1.66
CLPTM1O96005 AC007225.2-201ENST00000562529 256 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 AC233266.2-201ENST00000567067 528 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 RBM22P1-201ENST00000578589 1214 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.67□□□□□ -1.66
CLPTM1O96005 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.67□□□□□ -1.66
CLPTM1O96005 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.67□□□□□ -1.66
CLPTM1O96005 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.67□□□□□ -1.66
CLPTM1O96005 AC005252.1-201ENST00000604518 1063 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 AC034229.4-201ENST00000607861 441 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.67□□□□□ -1.66
CLPTM1O96005 AL592494.3-201ENST00000609485 464 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 AL512624.1-201ENST00000613638 469 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.67□□□□□ -1.66
CLPTM1O96005 AC015722.2-201ENST00000622210 551 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 AP000943.4-201ENST00000622912 357 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 AC019080.5-201ENST00000624891 757 ntBASIC4.67□□□□□ -1.66
CLPTM1O96005 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.67□□□□□ -1.66
CLPTM1O96005 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.67□□□□□ -1.66
CLPTM1O96005 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.67□□□□□ -1.66
CLPTM1O96005 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLPTM1O96005 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLPTM1O96005 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLPTM1O96005 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLPTM1O96005 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CLPTM1O96005 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CLPTM1O96005 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLPTM1O96005 MIR133B-201ENST00000362210 119 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 RNU1-108P-201ENST00000362556 161 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLPTM1O96005 AC093719.1-202ENST00000392735 373 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 HSPA8P15-201ENST00000401676 786 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.66□□□□□ -1.66
CLPTM1O96005 RPL7L1P9-201ENST00000431298 745 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.66□□□□□ -1.66
CLPTM1O96005 AL512661.1-201ENST00000434586 1253 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLPTM1O96005 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLPTM1O96005 RPS26P41-201ENST00000450370 284 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 EIF4A1P11-201ENST00000451239 222 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 TVP23BP2-201ENST00000455082 615 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 RPS4XP1-201ENST00000482189 787 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 RN7SL205P-201ENST00000490174 284 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.66□□□□□ -1.66
CLPTM1O96005 TPT1P8-201ENST00000510120 555 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 MYL12AP1-201ENST00000518490 515 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 AC004923.2-201ENST00000529649 369 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.66□□□□□ -1.66
CLPTM1O96005 AP004607.2-201ENST00000533949 322 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms