Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SSSCA1O60232 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.53□□□□□ -1.84
SSSCA1O60232 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSSCA1O60232 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.53□□□□□ -1.84
SSSCA1O60232 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSSCA1O60232 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.53□□□□□ -1.85
SSSCA1O60232 AL450326.2-201ENST00000421913 1962 ntBASIC3.52□□□□□ -1.85
SSSCA1O60232 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SSSCA1O60232 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SSSCA1O60232 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.52□□□□□ -1.85
SSSCA1O60232 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SSSCA1O60232 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSSCA1O60232 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.52□□□□□ -1.85
SSSCA1O60232 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SSSCA1O60232 AC019155.1-201ENST00000382242 574 ntBASIC3.52□□□□□ -1.85
SSSCA1O60232 SNORD66.1-201ENST00000391230 76 ntBASIC3.52□□□□□ -1.85
SSSCA1O60232 SDHCP2-201ENST00000398565 501 ntBASIC3.52□□□□□ -1.85
SSSCA1O60232 CHMP1B2P-201ENST00000399581 597 ntBASIC3.52□□□□□ -1.85
SSSCA1O60232 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SSSCA1O60232 GAPDHP49-201ENST00000421421 961 ntBASIC3.52□□□□□ -1.85
SSSCA1O60232 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.52□□□□□ -1.85
SSSCA1O60232 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.52□□□□□ -1.85
SSSCA1O60232 FGF12-202ENST00000430714 603 ntTSL 2 BASIC3.52□□□□□ -1.85
SSSCA1O60232 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC3.52□□□□□ -1.85
SSSCA1O60232 RPSAP41-201ENST00000439695 860 ntBASIC3.52□□□□□ -1.85
SSSCA1O60232 RPL23AP43-201ENST00000446445 471 ntBASIC3.52□□□□□ -1.85
SSSCA1O60232 RBMY2TP-201ENST00000451162 947 ntBASIC3.52□□□□□ -1.85
SSSCA1O60232 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.52□□□□□ -1.85
SSSCA1O60232 SETP20-201ENST00000457046 852 ntBASIC3.52□□□□□ -1.85
SSSCA1O60232 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.52□□□□□ -1.85
SSSCA1O60232 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.52□□□□□ -1.85
SSSCA1O60232 RNU6-964P-201ENST00000516524 69 ntBASIC3.52□□□□□ -1.85
SSSCA1O60232 SOX5P1-201ENST00000524155 1127 ntBASIC3.52□□□□□ -1.85
SSSCA1O60232 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.52□□□□□ -1.85
SSSCA1O60232 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.52□□□□□ -1.85
SSSCA1O60232 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.52□□□□□ -1.85
SSSCA1O60232 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.52□□□□□ -1.85
SSSCA1O60232 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.52□□□□□ -1.85
SSSCA1O60232 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC3.52□□□□□ -1.85
SSSCA1O60232 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.52□□□□□ -1.85
SSSCA1O60232 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC3.52□□□□□ -1.85
SSSCA1O60232 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.52□□□□□ -1.85
SSSCA1O60232 MIR4727-201ENST00000622232 55 ntBASIC3.52□□□□□ -1.85
SSSCA1O60232 AC112694.2-201ENST00000623697 768 ntBASIC3.52□□□□□ -1.85
SSSCA1O60232 AC138907.10-201ENST00000623708 983 ntBASIC3.52□□□□□ -1.85
SSSCA1O60232 AC008785.1-201ENST00000624475 456 ntBASIC3.52□□□□□ -1.85
SSSCA1O60232 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.52□□□□□ -1.85
SSSCA1O60232 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC3.52□□□□□ -1.85
SSSCA1O60232 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.52□□□□□ -1.85
SSSCA1O60232 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSSCA1O60232 AC018555.1-201ENST00000567548 1980 ntBASIC3.52□□□□□ -1.85
SSSCA1O60232 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SSSCA1O60232 MAPK10-253ENST00000641010 4072 ntBASIC3.52□□□□□ -1.85
SSSCA1O60232 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SSSCA1O60232 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.51□□□□□ -1.85
SSSCA1O60232 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SSSCA1O60232 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SSSCA1O60232 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SSSCA1O60232 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SSSCA1O60232 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SSSCA1O60232 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SSSCA1O60232 AL607077.1-201ENST00000401718 499 ntBASIC3.51□□□□□ -1.85
SSSCA1O60232 AP000357.1-201ENST00000409926 1165 ntBASIC3.51□□□□□ -1.85
SSSCA1O60232 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC3.51□□□□□ -1.85
SSSCA1O60232 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC3.51□□□□□ -1.85
SSSCA1O60232 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.51□□□□□ -1.85
SSSCA1O60232 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SSSCA1O60232 PA2G4P6-201ENST00000438325 1197 ntBASIC3.51□□□□□ -1.85
SSSCA1O60232 GSTA7P-201ENST00000438425 448 ntBASIC3.51□□□□□ -1.85
SSSCA1O60232 AC073850.1-201ENST00000449243 255 ntBASIC3.51□□□□□ -1.85
SSSCA1O60232 NPM1P39-201ENST00000449818 867 ntBASIC3.51□□□□□ -1.85
SSSCA1O60232 AC090568.1-201ENST00000509499 856 ntBASIC3.51□□□□□ -1.85
SSSCA1O60232 RN7SKP276-201ENST00000516242 268 ntBASIC3.51□□□□□ -1.85
SSSCA1O60232 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.51□□□□□ -1.85
SSSCA1O60232 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SSSCA1O60232 RBM7-208ENST00000545678 867 ntTSL 3 BASIC3.51□□□□□ -1.85
SSSCA1O60232 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.51□□□□□ -1.85
SSSCA1O60232 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.51□□□□□ -1.85
SSSCA1O60232 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.51□□□□□ -1.85
SSSCA1O60232 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.51□□□□□ -1.85
SSSCA1O60232 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC3.51□□□□□ -1.85
SSSCA1O60232 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.51□□□□□ -1.85
SSSCA1O60232 AC068790.5-201ENST00000602741 355 ntBASIC3.51□□□□□ -1.85
SSSCA1O60232 AP000864.1-201ENST00000609424 650 ntBASIC3.51□□□□□ -1.85
SSSCA1O60232 AC026124.2-201ENST00000621847 656 ntBASIC3.51□□□□□ -1.85
SSSCA1O60232 AL512356.3-201ENST00000623005 461 ntBASIC3.51□□□□□ -1.85
SSSCA1O60232 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SSSCA1O60232 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SSSCA1O60232 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
SSSCA1O60232 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SSSCA1O60232 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SSSCA1O60232 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SSSCA1O60232 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SSSCA1O60232 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.51□□□□□ -1.85
SSSCA1O60232 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.5□□□□□ -1.85
SSSCA1O60232 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SSSCA1O60232 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SSSCA1O60232 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
SSSCA1O60232 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.5□□□□□ -1.85
SSSCA1O60232 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms