Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 FKBP1BP1-201ENST00000553366 325 ntBASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 AC209154.1-201ENST00000582156 337 ntBASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 AL139395.1-201ENST00000603662 160 ntBASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 AL672167.2-201ENST00000377164 879 ntBASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 AL590762.2-201ENST00000395798 571 ntBASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 BX510359.2-201ENST00000417920 305 ntBASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 OR51A6P-201ENST00000418680 1004 ntBASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 AC007394.1-201ENST00000421941 531 ntBASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 Z74021.1-201ENST00000423610 407 ntBASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 PA2G4P6-201ENST00000438325 1197 ntBASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 AL353748.1-201ENST00000440753 474 ntBASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 AC063943.1-201ENST00000465434 453 ntBASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 AC092324.1-201ENST00000468671 324 ntBASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 AC093270.2-201ENST00000486157 792 ntBASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 AC025164.1-201ENST00000496249 478 ntBASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 AC093249.4-201ENST00000564755 259 ntBASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 OR1AB1P-201ENST00000585564 761 ntBASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 AC008759.1-201ENST00000589783 983 ntBASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 AC008638.3-201ENST00000603341 463 ntBASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 AL031320.1-201ENST00000604177 357 ntBASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 AC023509.5-201ENST00000617434 807 ntBASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 AC002044.3-201ENST00000623314 541 ntBASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 AC087190.4-201ENST00000574616 8334 ntBASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 AL445487.1-201ENST00000415694 1580 ntBASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.27□□□□□ -1.73
TRAPPC4Q9Y296 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 AL442639.1-201ENST00000625030 1899 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 OR56B2P-201ENST00000317102 954 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 SNORA58B-201ENST00000364259 136 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 RNA5SP87-201ENST00000384155 118 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 AC240504.1-201ENST00000395709 845 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 ARL4AP5-201ENST00000404372 599 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 AL080315.1-201ENST00000406055 466 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 AC106901.1-201ENST00000425086 698 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 AC104837.2-201ENST00000427236 424 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 CYCSP11-201ENST00000436426 315 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 H2AFZP5-201ENST00000446960 382 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 AC010733.1-201ENST00000451515 401 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 FGF7P3-201ENST00000454645 303 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 RN7SL826P-201ENST00000479724 288 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 AC016687.1-201ENST00000482574 353 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 AC012158.1-204ENST00000483430 465 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 AC231760.1-201ENST00000498002 260 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 AC091868.1-201ENST00000508746 304 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 RN7SKP276-201ENST00000516242 268 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 AC090151.1-201ENST00000520784 730 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 AP001880.2-201ENST00000538233 448 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 UBE2FP2-201ENST00000566646 462 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 AL137072.1-201ENST00000603444 466 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 AC138473.1-201ENST00000605717 526 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms